Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  132 bits (332), Expect = 4e-35
 Identities = 83/277 (29%), Positives = 144/277 (51%), Gaps = 4/277 (1%)

Query: 41  LARKQQAAERVASATAELLAGLEES----SSAMTQLRSSMEQIAVGAEESSSATKQSETA 96
           L + Q   +++     EL+ G+       +SA  QL +  EQ   G     + T    TA
Sbjct: 222 LGQLQSGLQQMMLNLHELIEGIRSGVIQVASAAEQLSAVTEQTNAGVNNQKTETDHVATA 281

Query: 97  VSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIEL 156
           +S+M   +   A  A ++    +  +Q   +    +NE ++ ++  +E  N S   +  L
Sbjct: 282 MSEMTATVQNVARDAEEASTAASAADQQASEGEQIVNEAIAQIKRLAEELNQSADAVRHL 341

Query: 157 SEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNA 216
            EQ+ KI   +  +  +A QTNLLALNAAIEA RAG+ G+GFAVVAD VR+LA + +++ 
Sbjct: 342 QEQSEKIGGVLDVIKAVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLALRTQRST 401

Query: 217 ANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLL 276
             IESL+  + +G   V++G++SS    ES V+  H     L  I +++  +   ++ + 
Sbjct: 402 EEIESLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENITSKVSIIQAMNQQIA 461

Query: 277 KAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKS 313
            AA++ S+ A    +   +V   +++ ++ CEE+  S
Sbjct: 462 TAAEQQSAVAEEINRSVINVRDISEQTASTCEETASS 498



 Score =  100 bits (249), Expect = 2e-25
 Identities = 70/313 (22%), Positives = 152/313 (48%), Gaps = 36/313 (11%)

Query: 330 SLDELTDELRTST-DIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAK 388
           +L EL + +R+    +  ++E+++A  E+ +AG+      ++ +  A++++++  Q++A+
Sbjct: 235 NLHELIEGIRSGVIQVASAAEQLSAVTEQTNAGVNNQKTETDHVATAMSEMTATVQNVAR 294

Query: 389 SVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATE 448
             E   T+ +  +Q A  G++                      V+E I  I    +   +
Sbjct: 295 DAEEASTAASAADQQASEGEQ---------------------IVNEAIAQIKRLAEELNQ 333

Query: 449 NLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNL 508
           + + + +++  S +I  ++D I  V+ QT +LA+N A+EAARAGE G+GFAVV+ ++++L
Sbjct: 334 SADAVRHLQEQSEKIGGVLDVIKAVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSL 393

Query: 509 ANDAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDV 568
           A     + E+I+  V  +Q   + V   +           +     +  L+N+ S++S +
Sbjct: 394 ALRTQRSTEEIESLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENITSKVSII 453

Query: 569 VLGSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAI 628
              +++I+ +A              +Q +  AEE + +       + Q +S+  E AS+ 
Sbjct: 454 QAMNQQIATAA--------------EQQSAVAEEINRSVINVRDISEQTASTCEETASSS 499

Query: 629 ENIAAVADELQSI 641
             +A +  EL+ +
Sbjct: 500 TELARLGHELERL 512



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 5/128 (3%)

Query: 48  AERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESS----SATKQSETAVSQMNNF 103
           A+ V S         EE  S +  ++S    +A G E S     S+ + +  AV  + N 
Sbjct: 387 ADEVRSLALRTQRSTEEIESLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENI 446

Query: 104 INEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKI 163
            ++ +     ++QI T  EQ    VA +IN  V NV+  SE+   + +     S + A++
Sbjct: 447 TSKVSIIQAMNQQIATAAEQQSA-VAEEINRSVINVRDISEQTASTCEETASSSTELARL 505

Query: 164 NDAVKQVI 171
              +++++
Sbjct: 506 GHELERLV 513



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 17/84 (20%), Positives = 38/84 (45%)

Query: 38  ARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAV 97
           A  +   Q   E     T   +  LE  +S ++ +++  +QIA  AE+ S+  ++   +V
Sbjct: 419 ASGMESSQLLGESSVEFTHRAVIALENITSKVSIIQAMNQQIATAAEQQSAVAEEINRSV 478

Query: 98  SQMNNFINEQATYATQSKQILTKL 121
             + +   + A+   ++    T+L
Sbjct: 479 INVRDISEQTASTCEETASSSTEL 502