Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 638 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2
Score = 125 bits (315), Expect = 4e-33
Identities = 77/277 (27%), Positives = 142/277 (51%), Gaps = 4/277 (1%)
Query: 41 LARKQQAAERVASATAELLAGLEES----SSAMTQLRSSMEQIAVGAEESSSATKQSETA 96
+ + Q + +R+ + +L+ G+ + +SA QL + EQ + G + T Q TA
Sbjct: 342 MGQLQASLQRMVISLRQLIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKTETDQVATA 401
Query: 97 VSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIEL 156
+ +M + E A A ++ + +Q + + E ++ ++ S+ S + M L
Sbjct: 402 MHEMTATVQEVARNAEEASEAAVAADQQAREGEKVVGEAIAQIERLSKEVGISTEAMGHL 461
Query: 157 SEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNA 216
++ KI + + +A QTNLLALNAAIEA RAG+ G+GFAVVAD VR+LA++ +K+
Sbjct: 462 KRESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKST 521
Query: 217 ANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLL 276
IE LI + +G E V+ + +S +S V+ L I + + ++ +
Sbjct: 522 EEIEDLILGLQSGTEQVATTLDNSRNLTDSSVELTRRAGGSLENITRTVSAIQSMNQQIA 581
Query: 277 KAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKS 313
AA++ S+ A + +V +++ +++ EE+ S
Sbjct: 582 AAAEQQSAVAEEINRSVVNVRDVSEQTASSSEETAAS 618
Score = 122 bits (307), Expect = 4e-32
Identities = 137/606 (22%), Positives = 260/606 (42%), Gaps = 104/606 (17%)
Query: 91 KQSETAVSQMNNFINEQATYATQ-----SKQILTKLEQDIVDVANKINEMVSNVQTSSER 145
+Q TAV+++ + E A + + Q L L Q + +V V Q + R
Sbjct: 76 EQGPTAVNELLGKLQESIQAALKRFVRPADQEL--LNQQLANVDEYKRAFVDLTQATQNR 133
Query: 146 QNDSVKRMIELSEQAAKIND---AVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVA 202
++ K AK+ D A++Q + N++ L+ ++ R G ++ A
Sbjct: 134 ESARSKLGANADNAVAKVTDVENALRQGDSVPQFNNVVELSKLLQQARYQVRGYTYSGKA 193
Query: 203 DTVRTLAEKAEKNAANIESL--------IKDISNGAEMVSNGVKSSSQKAESEVQKG--- 251
D + + E N ESL ++ AE + + +Q +S+V
Sbjct: 194 DAEQPALDAIENVLKNFESLPGKLPEQHATNLQQAAESMKAYRAAVNQFRDSQVASASAL 253
Query: 252 ----------HVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALK-GSESVSQAA 300
H +NK LT + E DL + A + + + AV+AL G +
Sbjct: 254 KRMVDQDTHLHELNKHLTASQIEKRDLET-----IHAKEALITVAVLALAFGLLAAWIIT 308
Query: 301 QEQSAACEESLKSLDQQ---QIALDGAVTAAQSLDELTDELRTS---------------T 342
++ +++L +L++ ++ + VT + +L L+ T
Sbjct: 309 RQIVVPLQQTLVALERVASGDLSHNLVVTRRDDMGQLQASLQRMVISLRQLIGGISDGVT 368
Query: 343 DIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQ 402
I ++E+++A E+ SAG+ ++++ A++++++ Q +A++ E + +Q
Sbjct: 369 QIASAAEQLSAVTEQTSAGVNSQKTETDQVATAMHEMTATVQEVARNAEEASEAAVAADQ 428
Query: 403 GARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQ 462
AR G++ V E I I +K + M +++R S +
Sbjct: 429 QAREGEK---------------------VVGEAIAQIERLSKEVGISTEAMGHLKRESDK 467
Query: 463 IDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQ 522
I ++D I +V+ QT +LA+N A+EAARAGE G+GFAVV+ ++++LA ++ E+I+D
Sbjct: 468 IGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEDL 527
Query: 523 VKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGI 582
+ +Q ++ A T LDN R+ V ++R S I
Sbjct: 528 ILGLQ------------------SGTEQVATT---LDNSRNLTDSSVELTRRAGGSLENI 566
Query: 583 ERSIADARAGMQQIATAAEESSHATGE-------AATAARQQSSSTSELASAIENIAAVA 635
R+++ ++ QQIA AAE+ S E + Q +SS+ E A++ +A +
Sbjct: 567 TRTVSAIQSMNQQIAAAAEQQSAVAEEINRSVVNVRDVSEQTASSSEETAASSAELARLG 626
Query: 636 DELQSI 641
LQ++
Sbjct: 627 VHLQTL 632
Score = 27.3 bits (59), Expect = 0.002
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 38 ARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAV 97
A TL + + T LE + ++ ++S +QIA AE+ S+ ++ +V
Sbjct: 539 ATTLDNSRNLTDSSVELTRRAGGSLENITRTVSAIQSMNQQIAAAAEQQSAVAEEINRSV 598
Query: 98 SQMNNFINEQATYATQ 113
+ + ++EQ +++
Sbjct: 599 VNVRD-VSEQTASSSE 613