Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 493 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2
Score = 120 bits (300), Expect = 2e-31
Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 47/348 (13%)
Query: 23 SANAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVG 82
SA P D++ + A Q +RV A L+ S +L SSM + G
Sbjct: 186 SARVPLACEDEVGQMAAAFNAMQAGYQRVVDTVASTARQLD---SGAARLASSMNDVRHG 242
Query: 83 AEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIV----DVANKINEMVSN 138
S T Q+ TA+++M+ + A +A ++ L+K + DV ++ + ++
Sbjct: 243 MLGQQSETDQAATAINEMSATVYHIAQHAGATRD-LSKTADTLAGNGHDVVARVQQSITG 301
Query: 139 VQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGF 198
+ + ++ + ++R L+E + KIN V + IA+QTNLLALNAAIEA RAG+ G+GF
Sbjct: 302 LSSGVQQTAEMIQR---LAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGF 358
Query: 199 AVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQL 258
AVVAD VR LA++ + + I +++ + G + ++ SS KA+ VQ+ L
Sbjct: 359 AVVADEVRNLAKRVQTSTDEITTMVSALQAGTRDAVDFMQESSLKADDCVQQAREAGDAL 418
Query: 259 TLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSES-VSQAAQEQSAACEESLKSLDQQ 317
I +AAV ++ S + ++ AA++QS EE
Sbjct: 419 AQI----------------------TAAVAQMRESNTQIAVAAEQQSHVAEE-------- 448
Query: 318 QIALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAAAAEELSAGIEEI 365
++ AV + + + E T +R + D +S E+A A ELS I ++
Sbjct: 449 ---MNRAVVSIRDVTENT--VRQTVDSATTSHELATLAGELSKAIGQL 491
Score = 84.7 bits (208), Expect = 9e-21
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 35/297 (11%)
Query: 349 EEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGK 408
+ VA+ A +L +G + S N++ + S A ++ ++ I Q A +
Sbjct: 216 DTVASTARQLDSGAARLASSMNDVRHGMLGQQSETDQAATAINEMSATVYHIAQHAGATR 275
Query: 409 ERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVD 468
+ + K + + + V + I ++ + E + +A S++I+ +V
Sbjct: 276 DLS----KTADTLAGNGHDVVARVQQSITGLSSGVQQTAEMIQRLAED---SQKINGVVS 328
Query: 469 GISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQE 528
I +++ QT +LA+N A+EAARAGE G+GFAVV+ +++NLA + ++I V +Q
Sbjct: 329 VIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTSTDEITTMVSALQ- 387
Query: 529 QINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIAD 588
D + + E + KA D V ++ ++ I ++A
Sbjct: 388 ------AGTRDAVDFMQESSLKA--------------DDCVQQAREAGDALAQITAAVAQ 427
Query: 589 ARAGMQQIATAAEESSHATGE---AATAARQQSSS----TSELASAIENIAAVADEL 638
R QIA AAE+ SH E A + R + + T + A+ +A +A EL
Sbjct: 428 MRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVRQTVDSATTSHELATLAGEL 484
Score = 48.9 bits (115), Expect = 5e-10
Identities = 67/309 (21%), Positives = 119/309 (38%), Gaps = 41/309 (13%)
Query: 197 GFAVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNK 256
G+ V DTV + A + + AA + S + D+ +G G +S + +A + + +
Sbjct: 210 GYQRVVDTVASTARQLDSGAARLASSMNDVRHGML----GQQSETDQAATAINEMSATVY 265
Query: 257 QLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKG-SESVSQAAQEQSAACEESLKSLD 315
+ DL K ++ L ++ + ++ G S V Q A+ E+S K
Sbjct: 266 HIAQHAGATRDLSKTADTLAGNGHDVVARVQQSITGLSSGVQQTAEMIQRLAEDSQK--- 322
Query: 316 QQQIALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGA 375
++G V+ S+ E T+ L + I AA A E+ G +
Sbjct: 323 -----INGVVSVIHSIAEQTNLLALNAAIE------AARAGEMGRGFAVV---------- 361
Query: 376 LNQISSGAQHMAKSVETGITSLTQIEQGARLGKERA-----ESSLKA--CEKMLTGIEEN 428
+ +++AK V+T +T + + G A ESSLKA C + +
Sbjct: 362 ----ADEVRNLAKRVQTSTDEITTMVSALQAGTRDAVDFMQESSLKADDCVQQAREAGDA 417
Query: 429 KTTVDEMILAITESTKAATENLNEMANI-ERISRQIDKIVDGISNVSIQTAMLAVNGAVE 487
+ + + ES + +++ E ++R + I D N QT A
Sbjct: 418 LAQITAAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVRQTVDSATTSHEL 477
Query: 488 AARAGEYGK 496
A AGE K
Sbjct: 478 ATLAGELSK 486