Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  123 bits (309), Expect = 2e-32
 Identities = 93/345 (26%), Positives = 169/345 (48%), Gaps = 43/345 (12%)

Query: 24  ANAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGA 83
           A  P    D++ + A      Q   +RV S  A+  A L+E +S   +L +SM  +  G 
Sbjct: 183 ARVPLDSRDEVGQMASAFNAMQGGYQRVVSTVAQAAARLDEGAS---RLATSMNDVHKGM 239

Query: 84  EESSSATKQSETAVSQMNNFINEQATYATQSK---QILTKLEQDIVDVANKINEMVSNVQ 140
                 T Q+ TA+++M+  +++ A +A +++   Q   +L  D   V  ++ + +S++ 
Sbjct: 240 RGQQGETDQAATAINEMSATVHQIAEHARETRDQSQNADRLAGDGHRVVGRVEKSISSLS 299

Query: 141 TSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAV 200
              ++  + ++   +L+  + +IN  V  +  IA+QTNLLALNAAIEA RAG+ G+GFAV
Sbjct: 300 QGVQQTGEMIE---QLAADSQRINGVVNVIHSIAEQTNLLALNAAIEAARAGEQGRGFAV 356

Query: 201 VADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTL 260
           VAD VR LA++ + +   I  +I  + +        ++ SS KA+               
Sbjct: 357 VADEVRNLAKRVQDSTDEITQMISGLQSMTRDAVEFMQESSLKAD--------------- 401

Query: 261 IRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSLDQQQIA 320
                 D V+++    +A + ++ A     + +  ++ AA++QS   EE           
Sbjct: 402 ------DCVREAHDAAQALEAIADAVAQMRESNTQIAVAAEQQSQVAEE----------- 444

Query: 321 LDGAVTAAQSLDELTDELRTSTDIVKSSEEVAAAAEELSAGIEEI 365
           L+ +VT  + + E T E   S+    +S E+AA + +LS  I ++
Sbjct: 445 LNRSVTGIRDVTERTVEQTVSS--ASTSAELAALSADLSRAIGQL 487



 Score = 85.1 bits (209), Expect = 7e-21
 Identities = 71/295 (24%), Positives = 138/295 (46%), Gaps = 35/295 (11%)

Query: 351 VAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKER 410
           VA AA  L  G   +  S N++   +          A ++     ++ QI + AR  +++
Sbjct: 214 VAQAAARLDEGASRLATSMNDVHKGMRGQQGETDQAATAINEMSATVHQIAEHARETRDQ 273

Query: 411 AESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGI 470
           ++++    +++          V++ I ++++  +   E + ++A     S++I+ +V+ I
Sbjct: 274 SQNA----DRLAGDGHRVVGRVEKSISSLSQGVQQTGEMIEQLA---ADSQRINGVVNVI 326

Query: 471 SNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQI 530
            +++ QT +LA+N A+EAARAGE G+GFAVV+ +++NLA    ++ ++I   +  +Q   
Sbjct: 327 HSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKRVQDSTDEITQMISGLQSMT 386

Query: 531 NIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIADAR 590
                   D +  + E + KA               D V  +   +++   I  ++A  R
Sbjct: 387 R-------DAVEFMQESSLKA--------------DDCVREAHDAAQALEAIADAVAQMR 425

Query: 591 AGMQQIATAAEESSHATGE---AATAARQQSSSTSE----LASAIENIAAVADEL 638
               QIA AAE+ S    E   + T  R  +  T E     AS    +AA++ +L
Sbjct: 426 ESNTQIAVAAEQQSQVAEELNRSVTGIRDVTERTVEQTVSSASTSAELAALSADL 480