Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a
Score = 114 bits (284), Expect = 1e-29
Identities = 72/259 (27%), Positives = 134/259 (51%), Gaps = 11/259 (4%)
Query: 32 DDLRRQARTLARKQ----QAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESS 87
D++ R R LA Q +A + S+ +L +SA T+L S E G + +
Sbjct: 243 DEVTRLLRALAMMQVNLREAMRHIGSSATQL-------ASAATELNSVTEDSYRGLNQQN 295
Query: 88 SATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQN 147
+ Q+ TA+++M + + E A A + + + ++ E V ++QT ++
Sbjct: 296 AEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQ 355
Query: 148 DSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRT 207
+ + L+ Q+ I + + IA+QTNLLALNAAIEA RAG+ G+GFAVVAD VR
Sbjct: 356 ATSTLVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRA 415
Query: 208 LAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVD 267
LA + +++ I+S++ + +G+ + + +S +A+S + + L+ I + +
Sbjct: 416 LAHRTQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQ 475
Query: 268 LVKDSEVLLKAADEMSSAA 286
+ + + V+ AA+E + +
Sbjct: 476 ISERNLVIASAAEEQAQVS 494
Score = 87.8 bits (216), Expect = 1e-21
Identities = 86/363 (23%), Positives = 164/363 (45%), Gaps = 39/363 (10%)
Query: 288 IALKGSESVSQAAQEQSAACEESLKSLDQQQIALDGAVTAAQSLDELTDELRT----STD 343
+AL + S+ Q A E+ I +DG DE+T LR +
Sbjct: 206 LALWLTRSIVGPLQRAVTAAEQVANGDLTHTIEVDGE-------DEVTRLLRALAMMQVN 258
Query: 344 IVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQ-IEQ 402
+ ++ + ++A +L++ E+N + + LNQ ++ A T I +T +E+
Sbjct: 259 LREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAA----TAINEMTSAVEE 314
Query: 403 GARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQ 462
AR +++S ++ L G TV + I +T++ +A + + +AN S+
Sbjct: 315 VARNAVSTSDASNQSSTSALAGQTRVIETV-QSIQTLTDNVQATSTLVQNLANQ---SQD 370
Query: 463 IDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQ 522
I K++D I +++ QT +LA+N A+EAARAGE G+GFAVV+ +++ LA+ + +
Sbjct: 371 IGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAH-------RTQQS 423
Query: 523 VKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGI 582
I ++ +R A L ++ +A T+ +S++ +IS
Sbjct: 424 TLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQIS------ 477
Query: 583 ERSIADARAGMQQIATAAEESSHATG------EAATAARQQSSSTSELASAIENIAAVAD 636
ER++ A A +Q + E + ++ A Q S+S+ EL+ ++ V
Sbjct: 478 ERNLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVS 537
Query: 637 ELQ 639
+
Sbjct: 538 RFK 540
Score = 38.5 bits (88), Expect = 8e-07
Identities = 64/337 (18%), Positives = 137/337 (40%), Gaps = 48/337 (14%)
Query: 230 AEMVSNGVKSSSQKAESEVQKGHVVNKQLTL---IRNEMVDLVKDSEVLLKAADEMSSAA 286
AE V+NG + + + + E + ++ + +R M + + L AA E++S
Sbjct: 225 AEQVANGDLTHTIEVDGEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVT 284
Query: 287 VIALKG----SESVSQAA---QEQSAACEESLKSLDQQQIALDGAVTAA----------- 328
+ +G + + QAA E ++A EE ++ A + + T+A
Sbjct: 285 EDSYRGLNQQNAEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETV 344
Query: 329 QSLDELTDELRTSTDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAK 388
QS+ LTD ++ ++ +V + + S +I L+ I S A+
Sbjct: 345 QSIQTLTDNVQATSTLV-----------------QNLANQSQDIGKVLDVIRSIAE---- 383
Query: 389 SVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTT--VDEMILAITESTKAA 446
+T + +L + AR G+ ++ A E ++T +D M+ A+ + A
Sbjct: 384 --QTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDSMVSAMRSGSAQA 441
Query: 447 TENLN-EMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDI 505
+++N A + + +S ++ ++ V A+ A E + V +I
Sbjct: 442 LDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVIASAAEEQAQVSREVDRNI 501
Query: 506 QNLANDAAENAEQIKDQVKNIQEQINIVRKDLADILS 542
N+ D + + Q +Q+ +++ + DL ++S
Sbjct: 502 VNI-RDLSMQSTQGANQISASSHELSRLAADLNQVVS 537