Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a
Score = 120 bits (300), Expect = 2e-31
Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 14/303 (4%)
Query: 28 KKEADDLRRQARTLARK-QQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEES 86
K E ++ R +A + + + SATA++ E+SS+ Q ++ Q G
Sbjct: 353 KDEFGEISRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQG---- 408
Query: 87 SSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQ 146
T Q TA+S+M+ + + A T + ++ ++ V +I+ + +Q S +
Sbjct: 409 ---TDQVATAISEMSATVKDVARSTTDAAEMSQRVNSSTVQGKTEIDNTIGLIQELSVQA 465
Query: 147 NDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVR 206
++ + + EL ++ I+ + + +ADQTNLLALNAAIEA RAG+ G+GFAVVAD VR
Sbjct: 466 EETSRIIDELKGESNSISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVR 525
Query: 207 TLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMV 266
LA+K + + +I+ +I ++ +G+E + ++ + KA+ + L I +
Sbjct: 526 NLAKKTQDSTVSIQKMIANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIA 585
Query: 267 DLVKDSEVLLKAADEMSSAAVIALKGSESVS------QAAQEQSAACEESLKSLDQQQIA 320
+ + + AA+E S A + + ++ A EQ+A L L +QQ
Sbjct: 586 TISDRNIQVASAAEEQSLVAEEIHRNVDDINSLVIQVSAGAEQTAVTSRELARLAEQQQG 645
Query: 321 LDG 323
L G
Sbjct: 646 LVG 648
Score = 99.0 bits (245), Expect = 6e-25
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 22/298 (7%)
Query: 328 AQSLDELTDEL-RTSTDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHM 386
+++LD + ++ ++I ++ +VA AAE+ SA + N++ + +Q+++ M
Sbjct: 360 SRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQVATAISEM 419
Query: 387 AKSVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAA 446
+ +V+ S T + AE S + + G KT +D I I E + A
Sbjct: 420 SATVKDVARSTT----------DAAEMSQRVNSSTVQG----KTEIDNTIGLIQELSVQA 465
Query: 447 TENLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQ 506
E + ++ S I ++D I V+ QT +LA+N A+EAARAGE G+GFAVV+ +++
Sbjct: 466 EETSRIIDELKGESNSISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVR 525
Query: 507 NLANDAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLD------- 559
NLA ++ I+ + N+Q + + L E A + L+
Sbjct: 526 NLAKKTQDSTVSIQKMIANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIA 585
Query: 560 NVRSRMSDVVLGSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQ 617
+ R V ++ S A I R++ D + + Q++ AE+++ + E A A QQ
Sbjct: 586 TISDRNIQVASAAEEQSLVAEEIHRNVDDINSLVIQVSAGAEQTAVTSRELARLAEQQ 643
Score = 62.0 bits (149), Expect = 8e-14
Identities = 81/358 (22%), Positives = 155/358 (43%), Gaps = 54/358 (15%)
Query: 51 VASATAELLA-----GLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQMNNFIN 105
+A +T +L A G +E L + QI+ E SAT Q TA Q
Sbjct: 337 MALSTRDLTARTRYIGKDEFGEISRNLDNMAHQISEVISEIGSATAQVATAAEQ------ 390
Query: 106 EQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKIND 165
+ A Q+ Q + + Q VA I+EM + V+ D + + +E + ++N
Sbjct: 391 -SSAVALQTNQNVAQQRQGTDQVATAISEMSATVK-------DVARSTTDAAEMSQRVNS 442
Query: 166 AVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKD 225
+ Q D T L +++A +T R + E K +N S + D
Sbjct: 443 STVQGKTEIDNTIGLIQELSVQA-------------EETSRIIDEL--KGESNSISSVLD 487
Query: 226 ISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSA 285
+ G V++ + A E + + ++ +E+ +L K ++
Sbjct: 488 VIRG---VADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQ-----------D 533
Query: 286 AVIALKGSESVSQAAQEQSAACEESLKSLDQQQIALDGAVTAAQSLDELTDELRTSTDIV 345
+ ++++ + Q+ E++AA + ++L + Q V A + L+E+ + + T +D
Sbjct: 534 STVSIQKMIANLQSGSERAAASMQ--ETLGKAQEGASNVVRAGELLEEIAEGIATISD-- 589
Query: 346 KSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQG 403
+ +VA+AAEE S EEI+R+ ++I + Q+S+GA+ A + + L + +QG
Sbjct: 590 -RNIQVASAAEEQSLVAEEIHRNVDDINSLVIQVSAGAEQTAVT-SRELARLAEQQQG 645
Score = 40.0 bits (92), Expect = 3e-07
Identities = 77/351 (21%), Positives = 144/351 (41%), Gaps = 52/351 (14%)
Query: 329 QSLDELTDELRT-STDIVKSSEEVAAAAEELSA--------GIEEINRSSNEIMGALNQI 379
Q D+ E+RT STD + S ++V A ++L+A GI SS + +
Sbjct: 87 QETDKAISEMRTQSTDGIPSPDKVYRALDDLTALRLKIDTLGINN-TESSTRFTDVIKTL 145
Query: 380 SSGAQHMAKSVET-----GITSLTQ-IEQGARLGKER-----AESSLKACEKMLTGIEEN 428
+ + S+E G++SL Q ++ R G+ER A + + +L+ N
Sbjct: 146 VGFSYSLEASIEDPEILRGLSSLNQFVDMKERAGRERVLLVQAFNQNRFDAPLLSRFSRN 205
Query: 429 KTTVDEMILAITE-STKAATENLN---------EMANIERISRQIDKIVDGISNV----- 473
+ A S + LN E+A ++R+ D + NV
Sbjct: 206 LGEFSGYLEAFQRWSPEVFKTKLNDVMQQPGSLEVARLQRLG--FDTPMGDPLNVKPEDW 263
Query: 474 -SIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNI-----Q 527
++ TA + + VEA E G+ ++TD ++ A + A I + +
Sbjct: 264 FNLSTARIDMMANVEA----ELGQNVVGLATDARSSAQSSLYVAVAIVVLMLIVVLWLAS 319
Query: 528 EQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIA 587
I ++ + D+ T+M + + LT + + ++ S+ + A I I+
Sbjct: 320 VIIRNIKVAVVDVNRTLMALSTRD-LTARTRYIGKDEFGEI---SRNLDNMAHQISEVIS 375
Query: 588 DARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIAAVADEL 638
+ + Q+ATAAE+SS + QQ T ++A+AI ++A ++
Sbjct: 376 EIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQVATAISEMSATVKDV 426
Score = 35.4 bits (80), Expect = 8e-06
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 25 NAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAE 84
N KK D + +A Q +ER A++ E L +E +S + + +E+IA G
Sbjct: 526 NLAKKTQDSTVSIQKMIANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIA 585
Query: 85 ESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSE 144
S Q +A A + + ++ +++ D IN +V V +E
Sbjct: 586 TISDRNIQVASA--------------AEEQSLVAEEIHRNVDD----INSLVIQVSAGAE 627
Query: 145 RQNDSVKRMIELSEQ 159
+ + + + L+EQ
Sbjct: 628 QTAVTSRELARLAEQ 642