Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  107 bits (268), Expect = 1e-27
 Identities = 71/285 (24%), Positives = 149/285 (52%), Gaps = 27/285 (9%)

Query: 41  LARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQM 100
           +A+ Q+++ +V ++  E+ A   +  +  T+  ++  +I   + E ++ ++     ++++
Sbjct: 262 VAQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEIGATSREIAATSRDLVRTMTEV 321

Query: 101 NNFINEQATYATQSKQILTKLEQ---DIVDVANKINEMVSNVQTSSERQNDSVKRMIELS 157
            +  ++ +  A   +Q L ++E     ++  AN +N                  ++  L+
Sbjct: 322 TSAADQASVLAGSGQQGLARMEDTMHQVMGAANLVNA-----------------KLAILN 364

Query: 158 EQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAA 217
           E+A  IN  V  ++ +ADQTNLL+LNAAIEA +AG++G+GFAVVA  VR LA++      
Sbjct: 365 EKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTAVATY 424

Query: 218 NIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLK 277
           +IE ++++I +    VS GV    + +E EV++G     ++T +  ++  ++   + L  
Sbjct: 425 DIEQMVREIQSA---VSAGVMGMDKFSE-EVRRGMF---EVTQVGEQLSQIIHQVQALAP 477

Query: 278 AADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSLDQQQIALD 322
               ++        G+E ++QA  + + A  ++++SL Q   A+D
Sbjct: 478 RVLMVNEGMQAQATGAEQINQALVQLADASSQTVESLRQASFAID 522



 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 72/309 (23%), Positives = 138/309 (44%), Gaps = 28/309 (9%)

Query: 332 DELTDELRTSTDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVE 391
           D +T+         +SS +V  +  E++A   +   ++ E      +I + ++ +A +  
Sbjct: 253 DMVTELTALVAQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEIGATSREIAATSR 312

Query: 392 TGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLN 451
             + ++T++   A      A S  +   +M   + +        ++       A    LN
Sbjct: 313 DLVRTMTEVTSAADQASVLAGSGQQGLARMEDTMHQ--------VMGAANLVNAKLAILN 364

Query: 452 EMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLAND 511
           E A        I+++V  I  V+ QT +L++N A+EA +AGEYG+GFAVV+T+++ LA+ 
Sbjct: 365 EKAG------NINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQ 418

Query: 512 AAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLG 571
            A     I+  V+ IQ  ++         +    EE ++    + Q   V  ++S ++  
Sbjct: 419 TAVATYDIEQMVREIQSAVSAGVMG----MDKFSEEVRRGMFEVTQ---VGEQLSQII-- 469

Query: 572 SKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENI 631
                     +   +     GMQ  AT AE+ + A  + A A+ Q   S  + + AI+ +
Sbjct: 470 -----HQVQALAPRVLMVNEGMQAQATGAEQINQALVQLADASSQTVESLRQASFAIDEL 524

Query: 632 AAVADELQS 640
           + VA  L+S
Sbjct: 525 SQVAVGLRS 533