Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 551 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a
Score = 117 bits (294), Expect = 1e-30
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 15/287 (5%)
Query: 48 AERVASATAELLAGLEESSSAMTQLRSSMEQIAV-------GAEESSSATKQSETAVSQM 100
A V + +L L++ SS+ TQL ++ E++ G + ++ Q+ TAV++M
Sbjct: 258 AAAVVAMQTQLRDTLQQISSSATQLAAAAEEMTAITEDGVQGIQRQNNEIDQAATAVNEM 317
Query: 101 NNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQA 160
+ + E A A + + + D + + V+++ T S + + EL+ Q+
Sbjct: 318 TSAVEEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMSTDVQKTATLIGELAGQS 377
Query: 161 AKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIE 220
I + + +A+QTNLLALNAAIEA RAG+ G+GFAVVAD VR LA + +++ + IE
Sbjct: 378 RDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIE 437
Query: 221 SLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAAD 280
L+ +I NG E ++ +++ A + N+ LT+I + ++ + V+ AA
Sbjct: 438 RLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISAAVSEINDLNLVIASAAQ 497
Query: 281 EMSSAA--------VIALKGSESVSQAAQEQSAACEESLKSLDQQQI 319
+ + A I ++S S A Q SA+ E S +LD I
Sbjct: 498 QQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALDLNNI 544
Score = 99.0 bits (245), Expect = 5e-25
Identities = 93/345 (26%), Positives = 177/345 (51%), Gaps = 33/345 (9%)
Query: 282 MSSAAVIALKGSESVSQAAQEQSAACEESLKSLDQQQIALDGAVTAAQSLDELTDELR-T 340
M+ ++++ G E + A ++ A + +++ I+ + + A ++ + +LR T
Sbjct: 215 MTIRSILSAIGGEPSTVATITRTIARGDLSSTIN---ISANDTSSVAAAVVAMQTQLRDT 271
Query: 341 STDIVKSSEEVAAAAEELSA----GIEEINRSSNEIMGALNQISSGAQHMAKSVETGITS 396
I S+ ++AAAAEE++A G++ I R +NEI +Q ++ M +VE
Sbjct: 272 LQQISSSATQLAAAAEEMTAITEDGVQGIQRQNNEI----DQAATAVNEMTSAVE----- 322
Query: 397 LTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANI 456
+ AR + A SS A G+ K TV + T+ K AT + E+A
Sbjct: 323 -----EVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMSTDVQKTATL-IGELAGQ 376
Query: 457 ERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENA 516
SR I K++D I ++ QT +LA+N A+EAARAGE G+GFAVV+ +++ LA+ ++
Sbjct: 377 ---SRDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQST 433
Query: 517 EQIKDQVKNIQ---EQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVL--- 570
+I+ V NIQ E+ + ++ S + A+ A ++ + S ++D+ L
Sbjct: 434 SEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISAAVSEINDLNLVIA 493
Query: 571 -GSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAA 614
+++ + A ++R++ + R Q ++ A++++ A+ E +T A
Sbjct: 494 SAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLA 538
Score = 28.1 bits (61), Expect = 0.001
Identities = 43/238 (18%), Positives = 90/238 (37%), Gaps = 32/238 (13%)
Query: 427 ENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGISNVS--IQTAMLAVNG 484
EN+ ++ + +K E L ++ +++ R K+ DG+ + + IQT +A
Sbjct: 93 ENEAAFSKLDELTVQLSKNTAETL-DVTLTQQLQRGYVKLRDGMRHQTSVIQTGDIAAAT 151
Query: 485 AVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQIN------------- 531
+ + + V +Q L + A + D ++ Q N
Sbjct: 152 NINRTEVKPFAEQ---VFKTLQTLREQGKQRAGERFDAQESSATQANNLSIAATLTIAIL 208
Query: 532 ---IVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVV-LGSKRISESAGGIERSIA 587
+ + ILS + E A + + R +S + + + S A +
Sbjct: 209 GVIVTLMTIRSILSAIGGEPSTVATITRTI--ARGDLSSTINISANDTSSVAAAVVAMQT 266
Query: 588 DARAGMQQI-------ATAAEESSHATGEAATAARQQSSSTSELASAIENIAAVADEL 638
R +QQI A AAEE + T + ++Q++ + A+A+ + + +E+
Sbjct: 267 QLRDTLQQISSSATQLAAAAEEMTAITEDGVQGIQRQNNEIDQAATAVNEMTSAVEEV 324
Score = 27.3 bits (59), Expect = 0.002
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 51 VASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQMNNFI 104
+ASA + E + +R Q + GA++++SA+++ T +NN +
Sbjct: 492 IASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALDLNNIV 545