Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 680 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a
Score = 112 bits (280), Expect = 5e-29
Identities = 88/290 (30%), Positives = 151/290 (52%), Gaps = 36/290 (12%)
Query: 63 EESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLE 122
E+ ++A+T+ +++ Q++ +E + + TA++ M I++ +T A++S + +
Sbjct: 403 EQVAAAVTETQATAMQLSAASEHQALQISAASTAINDMAASIDQVSTNASESSAVAERS- 461
Query: 123 QDIVDVANKINEMVSN----VQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTN 178
V +ANK NE+V N + E+ D+ KR+ L E + +I D V + IADQTN
Sbjct: 462 ---VTIANKGNEVVQNTIHGMDNIREQIQDTSKRIKRLGESSQEIGDIVSLIDDIADQTN 518
Query: 179 LLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVK 238
+LALNAAI+A AG G+GFAVVAD V+ LAE++ IE+L++ I N +N
Sbjct: 519 ILALNAAIQASMAGDAGRGFAVVADEVQRLAERSSSATKQIETLVRAIQND----TNEAV 574
Query: 239 SSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQ 298
S ++ SEV +G L +D+ V A E+ + + + ES++
Sbjct: 575 ISMEQTTSEVVRG--------------ARLAQDAGV---ALGEIEGVSRVLAELIESITD 617
Query: 299 AAQEQ--SAACEESLKSLDQQQIALDGAVTAAQ-----SLDELTDELRTS 341
AA +Q SA + ++ QQ + + T+A +L ++ E+R S
Sbjct: 618 AAHQQAESAGQISQIMTVIQQTTSQTTSGTSATAESIGNLAKMASEMRRS 667
Score = 103 bits (258), Expect = 2e-26
Identities = 123/634 (19%), Positives = 260/634 (41%), Gaps = 69/634 (10%)
Query: 48 AERVASATAELLAGLEESSSAMTQLRSSME---------QIAVGAEESSSATKQSETAVS 98
++R+A E AG ++ + R+ + A G + + V
Sbjct: 59 SQRIAKNATEAAAGKTQAFKLLADARNDFDVRWGYLRKGDPATGLPAAPELIRDELRTVQ 118
Query: 99 QMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSER--QNDSVKRMIEL 156
+ + + S+Q + L Q +A I ++ + + E Q+ + + +
Sbjct: 119 RDWEGLRKSTDVILASEQTVLSLHQVAATLAETIPQLQAEYEKVVESLLQSRAPAAQVVV 178
Query: 157 SEQAAKINDAVKQVIHIADQTNLLALNAAIEAGR-AGKHGKGFAVVADTVRTLA------ 209
+++ A + + + ++ + A+ AA GR A + G+ + + TL
Sbjct: 179 AQRQALLAERILGSVNTVLAGDETAVQAADAFGRDASQFGRVLNGMLEGNATLRISQVED 238
Query: 210 EKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLI------RN 263
A A I L + +S + + +++S + + G++ N TL+ N
Sbjct: 239 RDARARLAEIAELFEFVSGSVDEI---LETSPELYQVREASGNIFNTSQTLLDETSVLAN 295
Query: 264 EMVDLVKDSEV---------LLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSL 314
+ +L K V LL A + V+ + + + + AQ+ ++ L
Sbjct: 296 SLENLAKRRTVNTVGGYVLGLLALASIILIGLVMVRETNRQLRETAQKSERNQTAIMRLL 355
Query: 315 DQQQIALDGAVTAAQSLDE-----LTDELRTSTDIVKSSE-EVAAAAEELSAGIEEINRS 368
D+ + DG +T S+ E + D + S D ++ + AE+++A + E +
Sbjct: 356 DEIENLADGDLTVTASVTEDFTGAIADSINYSIDQLRELVVTINLTAEQVAAAVTETQAT 415
Query: 369 SNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEEN 428
+ Q+S+ ++H A + T++ + A S E+ +T +
Sbjct: 416 AM-------QLSAASEHQALQISAASTAINDMAASIDQVSTNASESSAVAERSVTIANKG 468
Query: 429 KTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEA 488
V I + + + + + S++I IV I +++ QT +LA+N A++A
Sbjct: 469 NEVVQNTIHGMDNIREQIQDTSKRIKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQA 528
Query: 489 ARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEE- 547
+ AG+ G+GFAVV+ ++Q LA ++ +QI+ V+ IQ N + S V+
Sbjct: 529 SMAGDAGRGFAVVADEVQRLAERSSSATKQIETLVRAIQNDTNEAVISMEQTTSEVVRGA 588
Query: 548 --AQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIADARAGMQQIATAAEESSH 605
AQ A + + +++ V +++++ ES A++ + QI T ++++
Sbjct: 589 RLAQDAGVALGEIEGVSRVLAELI-------ESITDAAHQQAESAGQISQIMTVIQQTT- 640
Query: 606 ATGEAATAARQQSSSTSELASAIENIAAVADELQ 639
Q +S TS A +I N+A +A E++
Sbjct: 641 ---------SQTTSGTSATAESIGNLAKMASEMR 665
Score = 47.0 bits (110), Expect = 3e-09
Identities = 97/486 (19%), Positives = 188/486 (38%), Gaps = 78/486 (16%)
Query: 30 EADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSA 89
+ +D +AR LA + E V+ + E+L E+S + Q+R + I ++S
Sbjct: 235 QVEDRDARAR-LAEIAELFEFVSGSVDEIL----ETSPELYQVREASGNIF-----NTSQ 284
Query: 90 TKQSETAV--SQMNNF-----INEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTS 142
T ET+V + + N +N Y + + + +V V + N +
Sbjct: 285 TLLDETSVLANSLENLAKRRTVNTVGGYVLGLLALASIILIGLVMV-RETNRQLRETAQK 343
Query: 143 SERQNDSVKRMIELSEQAA--------------------KINDAVKQVIHIADQTNLLAL 182
SER ++ R+++ E A IN ++ Q+ + NL A
Sbjct: 344 SERNQTAIMRLLDEIENLADGDLTVTASVTEDFTGAIADSINYSIDQLRELVVTINLTAE 403
Query: 183 NAAIEAGRAGKHGKGFAVVADTVRT---LAEKAEKNAANIESL---IKDISNGAEMVSNG 236
A A V +T T L+ +E A I + I D++ + VS
Sbjct: 404 QVA-------------AAVTETQATAMQLSAASEHQALQISAASTAINDMAASIDQVSTN 450
Query: 237 VKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESV 296
SS AE V + NK +++N + D + K + +
Sbjct: 451 ASESSAVAERSVT---IANKGNEVVQNT-----------IHGMDNIREQIQDTSKRIKRL 496
Query: 297 SQAAQEQSAACEESLKSLDQQQI-ALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAAAA 355
+++QE DQ I AL+ A+ A+ + D + ++ + +E ++A
Sbjct: 497 GESSQEIGDIVSLIDDIADQTNILALNAAIQASMAGDAGRGFAVVADEVQRLAERSSSAT 556
Query: 356 EELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAESSL 415
+++ + I +NE + ++ Q +S A+ + +L +IE +R+ E ES
Sbjct: 557 KQIETLVRAIQNDTNEAVISMEQTTSEVVRGARLAQDAGVALGEIEGVSRVLAELIESIT 616
Query: 416 KACEKMLTG---IEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGISN 472
A + I + T + + T T A E++ N+ +++ ++ + V G +
Sbjct: 617 DAAHQQAESAGQISQIMTVIQQTTSQTTSGTSATAESI---GNLAKMASEMRRSVSGFAL 673
Query: 473 VSIQTA 478
S + A
Sbjct: 674 PSSKKA 679
Score = 38.9 bits (89), Expect = 8e-07
Identities = 101/510 (19%), Positives = 184/510 (36%), Gaps = 83/510 (16%)
Query: 202 ADTVRTLAEKAEKNAANIES-------LIKDISNGAEMVSNGVKSSSQKAESEVQKGHVV 254
A +R L+++ KNA + L+ D N + V G A ++
Sbjct: 52 AGELRVLSQRIAKNATEAAAGKTQAFKLLADARNDFD-VRWGYLRKGDPATGLPAAPELI 110
Query: 255 NKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSL 314
+L ++ + L K ++V+L + + S +A +E++ Q E E L+S
Sbjct: 111 RDELRTVQRDWEGLRKSTDVILASEQTVLSLHQVAATLAETIPQLQAEYEKVVESLLQSR 170
Query: 315 DQQQIALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAA-AAEELSAGIEEINRSSNEIM 373
A V AQ L + + S + V + +E A AA+ + R N ++
Sbjct: 171 -----APAAQVVVAQRQALLAERILGSVNTVLAGDETAVQAADAFGRDASQFGRVLNGML 225
Query: 374 --GALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTT 431
A +IS A++ I L + G+ E E+S + + + N
Sbjct: 226 EGNATLRISQVEDRDARARLAEIAELFEFVSGSV--DEILETSPELYQ--VREASGNIFN 281
Query: 432 VDEMILAITESTKAATENLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAV--EAA 489
+ +L T + ENL + + + + ++ S + I M+ E A
Sbjct: 282 TSQTLLDETSVLANSLENLAKRRTVNTVGGYVLGLLALASIILIGLVMVRETNRQLRETA 341
Query: 490 RAGEYGKGFAVVSTD-IQNLAN-DAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEE 547
+ E + + D I+NLA+ D A +D I + IN L +++ T+
Sbjct: 342 QKSERNQTAIMRLLDEIENLADGDLTVTASVTEDFTGAIADSINYSIDQLRELVVTINLT 401
Query: 548 AQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIADARAGMQQIATAAEESSHAT 607
A++ A + + ++S S+ + +I D A + Q++T A ESS
Sbjct: 402 AEQVAAAVTETQATAMQLS---AASEHQALQISAASTAINDMAASIDQVSTNASESSAVA 458
Query: 608 GEAATAA-----------------RQQSSSTS--------------ELASAIENIA---- 632
+ T A R+Q TS ++ S I++IA
Sbjct: 459 ERSVTIANKGNEVVQNTIHGMDNIREQIQDTSKRIKRLGESSQEIGDIVSLIDDIADQTN 518
Query: 633 ---------------------AVADELQSI 641
VADE+Q +
Sbjct: 519 ILALNAAIQASMAGDAGRGFAVVADEVQRL 548