Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  130 bits (328), Expect = 1e-34
 Identities = 81/277 (29%), Positives = 144/277 (51%), Gaps = 4/277 (1%)

Query: 41  LARKQQAAERVASATAELLAGLEES----SSAMTQLRSSMEQIAVGAEESSSATKQSETA 96
           L + Q   +R+  +  EL+ G+ +     +SA  +L +  EQ + G       T Q  TA
Sbjct: 342 LGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATA 401

Query: 97  VSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIEL 156
           + +M   + E A  A ++ +     ++   D    +NE ++ ++  +    +S + M  L
Sbjct: 402 MHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGAL 461

Query: 157 SEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNA 216
            +++ KI   +  +  +A+QTNLLALNAAIEA RAG+ G+GFAVVAD VR+LA++ +K+ 
Sbjct: 462 KQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKST 521

Query: 217 ANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLL 276
             IE+LI  + +G +  +  + SS + + S V+        L  I   +  +   ++ + 
Sbjct: 522 EEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIA 581

Query: 277 KAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKS 313
            AA+E S+ A    +   +V   +++ SAA EE+  S
Sbjct: 582 AAAEEQSATAEEINRSIINVRDVSEQTSAASEETAAS 618



 Score =  106 bits (264), Expect = 4e-27
 Identities = 83/319 (26%), Positives = 156/319 (48%), Gaps = 52/319 (16%)

Query: 330 SLDELTDELRTS-TDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAK 388
           SL EL   +R   T I  ++EE++A  E+ SAG+      ++++  A++++++  Q +A+
Sbjct: 355 SLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVAR 414

Query: 389 SVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATE 448
           + E    +    ++ AR G+                       V+E I  I     A   
Sbjct: 415 NAEEASEAAVAADRQARDGER---------------------VVNEAIAQIERLASAVGN 453

Query: 449 NLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNL 508
           +   M  +++ S +I  ++D I +V+ QT +LA+N A+EAARAGE G+GFAVV+ ++++L
Sbjct: 454 SSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSL 513

Query: 509 ANDAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDV 568
           A    ++ E+I+  +  +Q              +TVM+ +++ + +  +L          
Sbjct: 514 AQRTQKSTEEIEALIARLQSG--------TQQATTVMDSSRELSTSSVEL---------- 555

Query: 569 VLGSKRISESAGGIERSIADARAGMQQIATAAEESSHATGE--------AATAARQQSSS 620
              ++R   S   I ++++  +A  QQIA AAEE S AT E            + Q S++
Sbjct: 556 ---TRRAGGSLANITKTVSSIQAMNQQIAAAAEEQS-ATAEEINRSIINVRDVSEQTSAA 611

Query: 621 TSELASAIENIAAVADELQ 639
           + E A++   +A + + LQ
Sbjct: 612 SEETAASSVELARLGNHLQ 630