Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (294), Expect = 1e-30
 Identities = 143/649 (22%), Positives = 278/649 (42%), Gaps = 91/649 (14%)

Query: 12  SSSFSPSNHSTSANAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQ 71
           SS F+  N  T  +      D+ + Q   L+   Q  E  + A   +L    +S S   +
Sbjct: 89  SSGFN--NQFTLLSGLLNNRDNFQGQLSGLSSSYQVLESNSKA---MLKARFDSLSQQEE 143

Query: 72  LRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVD---- 127
           L    E++   A+++SS         S  N    E A  A      +T +   + D    
Sbjct: 144 LLKLREKLENSADDASSNLFDLIDLESSQNQTEREIAAAAGAIDTTMTGIITTVYDLVAA 203

Query: 128 --------VANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNL 179
                   ++ +++ M+  V+T  E  +   + +I+ ++  + +ND   +V+ + +  + 
Sbjct: 204 EERSKYELISKELDYMLGEVKTKMEYISRHGEGIID-ADLVSTLNDDSTKVLKMLEGKDT 262

Query: 180 LALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKS 239
           L    + +        +   +V     T+ E+ ++ A +IE++  DISN A    N + S
Sbjct: 263 LVTLKSRQIDSTQLTSEKLTLVEKNALTVTEQMKRLAKDIETVTNDISNQA---LNDINS 319

Query: 240 SSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQA 299
           +S +              L L+            + +  A  +S A V  LK S      
Sbjct: 320 ASLRT-------------LILV-----------VIAIVVAVVISFAVVRPLKRSLDEVNG 355

Query: 300 AQEQSAACEESLKSLDQQQIALDGAVTAAQSLDELTDELRTS-TDIVKSSEEVAAAAEEL 358
           A    A+ + + K  D      D     +++ + L D LR+    I+  S ++AAAAEE 
Sbjct: 356 ALNVLASGDLTHKLDDTGH---DEFAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEET 412

Query: 359 SA-------GIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERA 411
           SA       GI+E     +++  A  ++SS A  +  S +  ++ + Q ++         
Sbjct: 413 SAITSQTTIGIQEQKSQVDQVATATTELSSSAHQVNMSADDALSQIKQADEET------- 465

Query: 412 ESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGIS 471
                  + M T  +ENK T    IL++ +    A++ +N+   +   S  I  I+D I 
Sbjct: 466 -------QHMRTIADENKRT----ILSLADEVAKASKVINK---VHSDSASIGSILDVIR 511

Query: 472 NVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQIN 531
            ++ QT +LA+N A+EAARAGE G+GFAVV+ ++++LA+       + +D  + IQ+ I 
Sbjct: 512 GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAS-------RTQDSTREIQQMIE 564

Query: 532 IVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIADARA 591
           ++++     ++ +     +A   +++ +     +  +     +  ++   I ++  +   
Sbjct: 565 VLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTISHSVHKAYDAGTHIAQAAQEQNL 624

Query: 592 GMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIAAVADELQS 640
             QQ++   E  +  + E A  A Q + S+ E       +A +A+ELQS
Sbjct: 625 VSQQVSEKLEHIAAISEETALGAEQTAKSSHE-------VARLAEELQS 666