Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 479 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B
Score = 116 bits (291), Expect = 2e-30
Identities = 94/331 (28%), Positives = 159/331 (48%), Gaps = 56/331 (16%)
Query: 19 NHSTSANAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQ 78
N S +A + AD L+R + + + Q+++ +A E L + + AM+Q+ S++E+
Sbjct: 196 NMSDMLSAIRNNADTLKRASSAFSNQAQSSDSLARRQHEFL---DSVAVAMSQMTSAIEE 252
Query: 79 IAVGAEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSN 138
++ A +S+ T+ + AV + S++ +T I +++ KI + S+
Sbjct: 253 VSANASATSTQTRSNAGAVKE--------------SQKRITNTVSGIAELSGKIGDASSS 298
Query: 139 VQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGF 198
V LS +A +I+ V + I++QTNLLALNAAIEA RAG+ G+GF
Sbjct: 299 VDA--------------LSREATEISAVVTVIDSISEQTNLLALNAAIEAARAGEQGRGF 344
Query: 199 AVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQL 258
AVVAD VRTLA + ++ I+S+I+ + +G++ +S +AE K
Sbjct: 345 AVVADEVRTLAGRTQQATVEIQSMIESLQSGSKALSGITGDIVSRAEQ--------GKSA 396
Query: 259 TLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSL---- 314
+ E V + DS + +M+S ++ +A+EQS AC E L
Sbjct: 397 VSLVGEDVGNIADS---INQVFDMAS----------HIAASAEEQSVACREIAAQLAEIR 443
Query: 315 DQQQIALDGAVTAAQSLDELTDELRTSTDIV 345
+Q + D A A + EL TDI+
Sbjct: 444 NQSGVISDNAHNALELAHELAQASVALTDIL 474
Score = 82.8 bits (203), Expect = 3e-20
Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 42/304 (13%)
Query: 356 EELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAESSL 415
++ S EI+R ++ + L+ I + A + ++ + AR E +S
Sbjct: 181 DDFSLIAREIDRCADNMSDMLSAIRNNADTLKRASSAFSNQAQSSDSLARRQHEFLDSVA 240
Query: 416 KACEKMLTGIEE-------NKTTVDEMILAITESTKAATENLNEMA-----------NIE 457
A +M + IEE T A+ ES K T ++ +A +++
Sbjct: 241 VAMSQMTSAIEEVSANASATSTQTRSNAGAVKESQKRITNTVSGIAELSGKIGDASSSVD 300
Query: 458 RISRQ---IDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAE 514
+SR+ I +V I ++S QT +LA+N A+EAARAGE G+GFAVV+ +++ LA +
Sbjct: 301 ALSREATEISAVVTVIDSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQ 360
Query: 515 NAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKR 574
+I+ ++++Q + DI+S E K+A+++
Sbjct: 361 ATVEIQSMIESLQSGSKALSGITGDIVSRA--EQGKSAVSL------------------- 399
Query: 575 ISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIAAV 634
+ E G I SI IA +AEE S A E A + + + ++ N +
Sbjct: 400 VGEDVGNIADSINQVFDMASHIAASAEEQSVACREIAAQLAEIRNQSGVISDNAHNALEL 459
Query: 635 ADEL 638
A EL
Sbjct: 460 AHEL 463
Score = 32.3 bits (72), Expect = 5e-05
Identities = 48/307 (15%), Positives = 125/307 (40%), Gaps = 35/307 (11%)
Query: 121 LEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNLL 180
+ ++I A+ +++M+S ++ ++ D++KR A+ +D++ + H + +
Sbjct: 186 IAREIDRCADNMSDMLSAIRNNA----DTLKRASSAFSNQAQSSDSLARRQHEFLDSVAV 241
Query: 181 ALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKDISN---GAEMVSNGV 237
A++ A V+ + + NA ++ K I+N G +S +
Sbjct: 242 AMSQMTSA---------IEEVSANASATSTQTRSNAGAVKESQKRITNTVSGIAELSGKI 292
Query: 238 KSSSQKAESEVQKGHVVNKQLTLIRN--EMVDLVKDSEVLLKA-ADEMSSAAVIALKGSE 294
+S ++ ++ ++ +T+I + E +L+ + + A A E +
Sbjct: 293 GDASSSVDALSREATEISAVVTVIDSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 352
Query: 295 SVSQAAQEQSAACEESLKSLDQQQIALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAAA 354
+++ Q+ + + ++SL AL G + DIV +E+ +A
Sbjct: 353 TLAGRTQQATVEIQSMIESLQSGSKALSGI----------------TGDIVSRAEQGKSA 396
Query: 355 AEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAESS 414
+ + I S N++ + I++ A+ + + L +I + + + A ++
Sbjct: 397 VSLVGEDVGNIADSINQVFDMASHIAASAEEQSVACREIAAQLAEIRNQSGVISDNAHNA 456
Query: 415 LKACEKM 421
L+ ++
Sbjct: 457 LELAHEL 463