Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., methyl-accepting chemotaxis protein from Pseudomonas sp. BP01

 Score =  121 bits (304), Expect = 6e-32
 Identities = 98/327 (29%), Positives = 155/327 (47%), Gaps = 39/327 (11%)

Query: 23  SANAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVG 82
           +A  P    D++ + A      Q    RV S  A   A L+   S   +L +SM  +  G
Sbjct: 185 AARVPLACGDEVGQMAGAFNAMQATYHRVVSTVAHTAAQLD---SGAARLAASMSNVRHG 241

Query: 83  AEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTS 142
                S T Q+ TA+++M+  ++  A +A  ++     L Q    +A    E+VS VQ S
Sbjct: 242 MLGQQSETDQAATAINEMSATVHHIAQHAGATRD----LSQTADTLAGSGKEVVSRVQDS 297

Query: 143 SERQNDSVKRMIE----LSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGF 198
               +  V+   E    L+E + KIN  V  +  IA+QTNLLALNAAIEA RAG  G+GF
Sbjct: 298 ISGLSSGVQHTAEMIRQLAEDSQKINGVVGVIHSIAEQTNLLALNAAIEAARAGDLGRGF 357

Query: 199 AVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQL 258
           AVVAD VR LA++ + +   I S++  + +G       ++ SS KA+             
Sbjct: 358 AVVADEVRNLAKRVQTSTDEITSMVSALQSGTRDAVEFMQESSYKAD------------- 404

Query: 259 TLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEE------SLK 312
                   D V+ ++   +A  E++SA     + +  ++ AA++QS   EE      S++
Sbjct: 405 --------DCVRQAQEAGEALAEITSAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIR 456

Query: 313 SLDQQQIALD-GAVTAAQSLDELTDEL 338
            + +Q +    G+ T +  L  L  EL
Sbjct: 457 DVTEQTVQQTVGSATTSSELATLAGEL 483



 Score = 79.7 bits (195), Expect = 3e-19
 Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 28/291 (9%)

Query: 351 VAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKER 410
           VA  A +L +G   +  S + +   +    S     A ++     ++  I Q A   ++ 
Sbjct: 217 VAHTAAQLDSGAARLAASMSNVRHGMLGQQSETDQAATAINEMSATVHHIAQHAGATRDL 276

Query: 411 AESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGI 470
           ++++    + +    +E  + V + I  ++   +   E + ++A     S++I+ +V  I
Sbjct: 277 SQTA----DTLAGSGKEVVSRVQDSISGLSSGVQHTAEMIRQLAED---SQKINGVVGVI 329

Query: 471 SNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQI 530
            +++ QT +LA+N A+EAARAG+ G+GFAVV+ +++NLA     + ++I   V  +Q   
Sbjct: 330 HSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITSMVSALQ--- 386

Query: 531 NIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIADAR 590
                   D +  + E + KA               D V  ++   E+   I  ++A  R
Sbjct: 387 ----SGTRDAVEFMQESSYKA--------------DDCVRQAQEAGEALAEITSAVAQMR 428

Query: 591 AGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIAAVADELQSI 641
               QIA AAE+ S    E   A       T +        A  + EL ++
Sbjct: 429 ESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTEQTVQQTVGSATTSSELATL 479