Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  124 bits (310), Expect = 1e-32
 Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 11/293 (3%)

Query: 27  PKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEES 86
           P   AD++ R    +   Q A   + S   +   G EE SSA  QL  +++Q+       
Sbjct: 239 PAPTADEVGRLVGAMGDMQTA---LRSTIGQTKMGAEEISSAAQQLNQTVKQMEQSVTVQ 295

Query: 87  SSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQ 146
           SSA+      + ++   IN  +     + ++  + ++   +    +  +V  +   S   
Sbjct: 296 SSASSAIAANIEELTVSINHVSDSTGDAARLAGESDEQAREGRETVERLVGEIDQVSHVV 355

Query: 147 NDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVR 206
             + +++ EL  ++AKI+  V  +  IADQTNLLALNAAIEA RAG+HG+GFAVVAD VR
Sbjct: 356 KAAAEQIGELEVESAKISSIVSVIKDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVR 415

Query: 207 TLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEV----QKGHVVNKQLTLIR 262
            L+E+   +   I  ++  I      V  G+       ES V    Q G  + K   + R
Sbjct: 416 KLSERTAHSTGEITQMVDSIQESTRQVVAGISGGVGAVESSVSHAQQAGETIAKLQEMAR 475

Query: 263 NEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSLD 315
             + +++ D ++ L+   E S+A+    +  E ++  A+E +AA  E+ ++ D
Sbjct: 476 -RVAEIIGDVDIALR---EQSTASTEVARKVEEIATHAEETNAAANETSRASD 524



 Score =  105 bits (263), Expect = 4e-27
 Identities = 75/292 (25%), Positives = 145/292 (49%), Gaps = 35/292 (11%)

Query: 355 AEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQG----ARLGKER 410
           AEE+S+  +++N++  ++  ++   SS +  +A ++E    S+  +       ARL  E 
Sbjct: 271 AEEISSAAQQLNQTVKQMEQSVTVQSSASSAIAANIEELTVSINHVSDSTGDAARLAGES 330

Query: 411 AESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGI 470
            E +            E + TV+ ++  I + +        ++  +E  S +I  IV  I
Sbjct: 331 DEQA-----------REGRETVERLVGEIDQVSHVVKAAAEQIGELEVESAKISSIVSVI 379

Query: 471 SNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQI 530
            +++ QT +LA+N A+EAARAGE+G+GFAVV+ +++ L+   A +  +I   V +IQE  
Sbjct: 380 KDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLSERTAHSTGEITQMVDSIQEST 439

Query: 531 NIVRKDLADILSTV---MEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIA 587
             V   ++  +  V   +  AQ+A  TI +L  +  R++++                 I 
Sbjct: 440 RQVVAGISGGVGAVESSVSHAQQAGETIAKLQEMARRVAEI-----------------IG 482

Query: 588 DARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIAAVADELQ 639
           D    +++ +TA+ E +    E AT A + +++ +E + A + +  VA E+Q
Sbjct: 483 DVDIALREQSTASTEVARKVEEIATHAEETNAAANETSRASDTLDRVAGEMQ 534



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 23/86 (26%), Positives = 43/86 (50%)

Query: 21  STSANAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIA 80
           S    A +      ++   T+A+ Q+ A RVA    ++   L E S+A T++   +E+IA
Sbjct: 447 SGGVGAVESSVSHAQQAGETIAKLQEMARRVAEIIGDVDIALREQSTASTEVARKVEEIA 506

Query: 81  VGAEESSSATKQSETAVSQMNNFINE 106
             AEE+++A  ++  A   ++    E
Sbjct: 507 THAEETNAAANETSRASDTLDRVAGE 532



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 24/249 (9%)

Query: 397 LTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANI 456
           L  ++   ++ +ER    +++ E ML G  E+K  +++ +  + E  +     L E A +
Sbjct: 50  LPSLQMVGKISQERLRYRVRSLEYMLPGSAEDKAKIEKSLAKLDEDVRTV---LKEYAPL 106

Query: 457 ERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDA-AEN 515
              S +  KI+D +   ++      V  A+   +AG+          + Q L      E 
Sbjct: 107 VTGSEE-QKILDEVGK-AVNAYKAVVEEAIVLEKAGK--------EEEAQQLRRKGWVEK 156

Query: 516 AEQIKDQVKNIQE-QINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLG--- 571
           A Q++D    + +       +  A  +S V   A  + LT   L  + + ++  +L    
Sbjct: 157 ANQLRDSTDALAKFNREGADRSAAQAMSDV-SSAISSGLTALVLGLLVALVASFLLARRI 215

Query: 572 SKRISESAGGIERSIADARAGMQQIATAAEESS--HATGEAATAARQQSSSTSELASAIE 629
           S+R+ E+  G  R  A    G     TA E      A G+  TA R   S+  +     E
Sbjct: 216 SRRLEEALAGARRIAAGDLTGALPAPTADEVGRLVGAMGDMQTALR---STIGQTKMGAE 272

Query: 630 NIAAVADEL 638
            I++ A +L
Sbjct: 273 EISSAAQQL 281



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 24/131 (18%), Positives = 57/131 (43%), Gaps = 10/131 (7%)

Query: 51  VASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQATY 110
           VA    +L      S+  +TQ+  S+++          +T+Q    +S     +    ++
Sbjct: 410 VADEVRKLSERTAHSTGEITQMVDSIQE----------STRQVVAGISGGVGAVESSVSH 459

Query: 111 ATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKINDAVKQV 170
           A Q+ + + KL++    VA  I ++   ++  S    +  +++ E++  A + N A  + 
Sbjct: 460 AQQAGETIAKLQEMARRVAEIIGDVDIALREQSTASTEVARKVEEIATHAEETNAAANET 519

Query: 171 IHIADQTNLLA 181
              +D  + +A
Sbjct: 520 SRASDTLDRVA 530