Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  122 bits (307), Expect = 3e-32
 Identities = 76/265 (28%), Positives = 141/265 (53%), Gaps = 6/265 (2%)

Query: 49  ERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQA 108
           +R+ ++  E+ +  E  ++A  ++ ++  ++++ +   S A       V +M   IN  A
Sbjct: 251 DRLQASFREISSHTEAVNTAANRVANASHEMSIASGHQSEAASSMAATVEEMTVSINHVA 310

Query: 109 TYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKINDAVK 168
             A ++ Q+ T   +        I + V+ + + +E    + +++ +L +Q+ +IN+ V 
Sbjct: 311 DRAGEANQLSTASGELAHKGEGIIGDTVAGINSIAETVRHASEQISQLEQQSERINNVVS 370

Query: 169 QVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKDISN 228
            +  +ADQTNLLALNAAIEA RAG+ G+GFAVVAD VR LAE+  ++   I S I ++  
Sbjct: 371 VIKEVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTTQSTQEIASTILEMQA 430

Query: 229 GAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLI---RNEMVDLVKDSEVLLKAADEMSSA 285
           GA+    G+ +  ++ ++ V +    N+ +  I       VD+V D   +  A  E S A
Sbjct: 431 GAQAAVQGIHAVVERVDTGVSRAEQANQAIQEIGDGSRRTVDMVGD---ISDAIREQSVA 487

Query: 286 AVIALKGSESVSQAAQEQSAACEES 310
           +    +  E ++Q ++E SAA + +
Sbjct: 488 STAIAQQVEKIAQMSEENSAAAQST 512



 Score = 99.4 bits (246), Expect = 4e-25
 Identities = 94/422 (22%), Positives = 189/422 (44%), Gaps = 54/422 (12%)

Query: 253 VVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIA-LKGSESVSQAAQEQSAACEESL 311
           ++++Q+  IR   VD  K+  VL  A     +  V A +K +E ++     ++A    S 
Sbjct: 122 LIDRQMASIRAGQVDKAKEDAVLAGALGRRIADNVEAHIKYNEELATQEVRKAAEAYSSG 181

Query: 312 KSLDQ--------------------QQIALDGAVTAAQSLDELTD-----ELRTSTDIVK 346
           K +                       + +L   VT  + ++   D     E+R S ++ +
Sbjct: 182 KVVSMIVMVLATLGVAGLGFLVYRHVEQSLGNMVTMFKRIEHDLDFTGRLEVRGSDEVAQ 241

Query: 347 SS-------EEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQH-------MAKSVET 392
           +S       + + A+  E+S+  E +N ++N +  A +++S  + H       MA +VE 
Sbjct: 242 ASTAFNRLLDRLQASFREISSHTEAVNTAANRVANASHEMSIASGHQSEAASSMAATVEE 301

Query: 393 GITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNE 452
              S+  +   A    + + +S +   K    I +    ++    +I E+ + A+E +++
Sbjct: 302 MTVSINHVADRAGEANQLSTASGELAHKGEGIIGDTVAGIN----SIAETVRHASEQISQ 357

Query: 453 MANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDA 512
           +   E+ S +I+ +V  I  V+ QT +LA+N A+EAARAGE G+GFAVV+ +++ LA   
Sbjct: 358 L---EQQSERINNVVSVIKEVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERT 414

Query: 513 AENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGS 572
            ++ ++I   +  +Q       + +  ++  V     +A       +     + ++  GS
Sbjct: 415 TQSTQEIASTILEMQAGAQAAVQGIHAVVERVDTGVSRA-------EQANQAIQEIGDGS 467

Query: 573 KRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIA 632
           +R  +  G I  +I +       IA   E+ +  + E + AA+  S +  ELA   + + 
Sbjct: 468 RRTVDMVGDISDAIREQSVASTAIAQQVEKIAQMSEENSAAAQSTSDTAGELAHLAQEMQ 527

Query: 633 AV 634
            V
Sbjct: 528 QV 529



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 25/135 (18%), Positives = 62/135 (45%), Gaps = 9/135 (6%)

Query: 31  ADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVG---AEESS 87
           AD++R+ A    R  Q+ + +AS   E+ AG   + +A+  + + +E++  G   AE+++
Sbjct: 404 ADEVRKLAE---RTTQSTQEIASTILEMQAG---AQAAVQGIHAVVERVDTGVSRAEQAN 457

Query: 88  SATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQN 147
            A ++      +  + + + +    +     T + Q +  +A    E  +  Q++S+   
Sbjct: 458 QAIQEIGDGSRRTVDMVGDISDAIREQSVASTAIAQQVEKIAQMSEENSAAAQSTSDTAG 517

Query: 148 DSVKRMIELSEQAAK 162
           +      E+ +  A+
Sbjct: 518 ELAHLAQEMQQVVAQ 532