Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  118 bits (296), Expect = 6e-31
 Identities = 81/272 (29%), Positives = 140/272 (51%), Gaps = 20/272 (7%)

Query: 49  ERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQA 108
           +R+ ++  E+    +  ++A  ++ ++  Q+++ +   S A       V +M   I   A
Sbjct: 251 DRLQASFREISNHTDAVNNAANRVATASHQMSIASGHQSEAASSMAATVEEMTVSITHVA 310

Query: 109 TYATQSKQILT-------KLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAA 161
             A ++ Q+ +       K E  I D    IN +   V+ +SE+       +  L +Q+ 
Sbjct: 311 DRAGEANQLSSASGALAHKGEGIIGDTVQGINGIAETVRNASEQ-------IARLEQQSE 363

Query: 162 KINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIES 221
           +IN+ V  +  +ADQTNLLALNAAIEA RAG+ G+GFAVVAD VR LAE+  ++   I S
Sbjct: 364 RINNVVAVIKEVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTTQSTQEIAS 423

Query: 222 LIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLI---RNEMVDLVKDSEVLLKA 278
            I ++  GA+   +G+ +  +K +  V +    N+ +  I     + VD+V D   +  A
Sbjct: 424 TILEMQAGAQAAVHGIHAVVEKVDEGVSRAEQANEAIQEIGEGSRKTVDMVGD---ISDA 480

Query: 279 ADEMSSAAVIALKGSESVSQAAQEQSAACEES 310
             E S A+    +  E ++Q ++E SAA + +
Sbjct: 481 IREQSMASTAIAQQVEKIAQMSEENSAAAQST 512



 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 98/442 (22%), Positives = 190/442 (42%), Gaps = 47/442 (10%)

Query: 201 VADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTL 260
           +ADT     EKA+        + K ++   E  S   K +   AE EV+K     +    
Sbjct: 127 IADTKAGHGEKAKNGMGQAGEVSKRLAENVEAHS---KYNEHLAEEEVRKAGEAYQT--- 180

Query: 261 IRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSLDQQQI- 319
              +++ +V    V+L     ++    +  +  +S         +  E+ L    + ++ 
Sbjct: 181 --GKVISIV----VILLCTAGVAGLGFMVYRHVDSSLGNMVSMFSRIEKELDFTGRLEVR 234

Query: 320 ALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQI 379
             D    A+ + + L D L+             A+  E+S   + +N ++N +  A +Q+
Sbjct: 235 GTDEVAQASSAFNRLLDRLQ-------------ASFREISNHTDAVNNAANRVATASHQM 281

Query: 380 SSGAQH-------MAKSVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTV 432
           S  + H       MA +VE    S+T +   A    + + +S     K    I +    +
Sbjct: 282 SIASGHQSEAASSMAATVEEMTVSITHVADRAGEANQLSSASGALAHKGEGIIGDTVQGI 341

Query: 433 DEMILAITESTKAATENLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAG 492
           +     I E+ + A+E   ++A +E+ S +I+ +V  I  V+ QT +LA+N A+EAARAG
Sbjct: 342 N----GIAETVRNASE---QIARLEQQSERINNVVAVIKEVADQTNLLALNAAIEAARAG 394

Query: 493 EYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAA 552
           E G+GFAVV+ +++ LA    ++ ++I   +  +Q         +  ++  V E   +A 
Sbjct: 395 EQGRGFAVVADEVRKLAERTTQSTQEIASTILEMQAGAQAAVHGIHAVVEKVDEGVSRA- 453

Query: 553 LTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAAT 612
                 +     + ++  GS++  +  G I  +I +       IA   E+ +  + E + 
Sbjct: 454 ------EQANEAIQEIGEGSRKTVDMVGDISDAIREQSMASTAIAQQVEKIAQMSEENSA 507

Query: 613 AARQQSSSTSELASAIENIAAV 634
           AA+  S +  ELA   + +  V
Sbjct: 508 AAQSTSDTAGELAHLAQEMQQV 529



 Score = 31.6 bits (70), Expect = 9e-05
 Identities = 22/132 (16%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 31  ADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSAT 90
           AD++R+ A    R  Q+ + +AS   E+ AG + +   +  +   +++    AE+++ A 
Sbjct: 404 ADEVRKLAE---RTTQSTQEIASTILEMQAGAQAAVHGIHAVVEKVDEGVSRAEQANEAI 460

Query: 91  KQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSV 150
           ++      +  + + + +    +     T + Q +  +A    E  +  Q++S+   +  
Sbjct: 461 QEIGEGSRKTVDMVGDISDAIREQSMASTAIAQQVEKIAQMSEENSAAAQSTSDTAGELA 520

Query: 151 KRMIELSEQAAK 162
               E+ +  A+
Sbjct: 521 HLAQEMQQVVAQ 532



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 50/258 (19%), Positives = 106/258 (41%), Gaps = 32/258 (12%)

Query: 400 IEQGARLGKERAESSLKACEKMLTG------IEENKTTVDEMILAITES---TKAA--TE 448
           +EQ     K+    +L+  EK+++       +E +K  V E    I  +   TKA    +
Sbjct: 78  VEQRIEGAKKDLLQALQDYEKLISDDKDRQYLETSKALVKEYYALIDPAIADTKAGHGEK 137

Query: 449 NLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNL 508
             N M     +S+++ + V+  S  +   A   V  A EA + G+      V+      +
Sbjct: 138 AKNGMGQAGEVSKRLAENVEAHSKYNEHLAEEEVRKAGEAYQTGKV-ISIVVILLCTAGV 196

Query: 509 ANDAAENAEQIKDQVKNIQEQINIVRKDL-----ADILSTVMEEAQKAALTIKQLDNVRS 563
           A         +   + N+    + + K+L      ++  T  E AQ ++   + LD +++
Sbjct: 197 AGLGFMVYRHVDSSLGNMVSMFSRIEKELDFTGRLEVRGTD-EVAQASSAFNRLLDRLQA 255

Query: 564 RMSDVVLGSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSE 623
              ++   +  ++ +A               ++ATA+ + S A+G  + AA   +++  E
Sbjct: 256 SFREISNHTDAVNNAAN--------------RVATASHQMSIASGHQSEAASSMAATVEE 301

Query: 624 LASAIENIAAVADELQSI 641
           +  +I ++A  A E   +
Sbjct: 302 MTVSITHVADRAGEANQL 319