Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  130 bits (328), Expect = 1e-34
 Identities = 93/328 (28%), Positives = 163/328 (49%), Gaps = 9/328 (2%)

Query: 13  SSFSPSNHSTSANAPKKEADDLRRQARTLARKQQAAE--RVASATAELLAGLEESSSAMT 70
           +S   +   ++  A + EA     +A   AR +  A+  ++A A A+L   +E  SS+  
Sbjct: 264 ASMQDATEKSAEAAKEAEAAQHASEAADAARAEAEAQSRKLAQAVADLQTVMERLSSSSE 323

Query: 71  QLRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVAN 130
           +L + +EQ + GAEE +    ++ TA+ +MN  + E A  A  + Q   +  ++    A+
Sbjct: 324 ELAAQVEQSSRGAEEQARRVAETATAIEEMNATVLEVARNAEDAAQHANQARKEAEQGAD 383

Query: 131 KINEMVSNVQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGR 190
            +NE+V+ +  +S +  +  + M  L +QA  I   +  +  IADQTNLLALNAAIEA R
Sbjct: 384 IVNEVVAAMSGTSAKAGELKEDMAGLEQQAMAIGRIMTVISDIADQTNLLALNAAIEAAR 443

Query: 191 AGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQK 250
           AG+ G+GFAVVAD VR LAEK       + + IK I  G E+  +       +  +   K
Sbjct: 444 AGEAGRGFAVVADEVRKLAEKTMHATHEVGAAIKGIQTGTELSIHAADDVVGRIGTLSHK 503

Query: 251 GHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEES 310
                + L  I   +     +   +  A+ + S+A       S+ ++ + ++ +    E+
Sbjct: 504 VRASGEALNRIVAAVQAATGEVSGIATASSQQSAA-------SDEIAHSVEDINRISSET 556

Query: 311 LKSLDQQQIALDGAVTAAQSLDELTDEL 338
            +++ Q  IA+    + AQ+L+ L   +
Sbjct: 557 AEAMRQSSIAVTELASQAQNLEGLISRM 584



 Score =  123 bits (308), Expect = 3e-32
 Identities = 84/347 (24%), Positives = 162/347 (46%), Gaps = 9/347 (2%)

Query: 294 ESVSQAAQEQSAACEESLKSLDQQQIALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAA 353
           + + QA +        S++   ++         AAQ   E  D  R   +    S ++A 
Sbjct: 249 QDLLQAVRAMVGTIMASMQDATEKSAEAAKEAEAAQHASEAADAARAEAEA--QSRKLAQ 306

Query: 354 AAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAES 413
           A  +L   +E ++ SS E+   + Q S GA+  A+ V    T++ ++          AE 
Sbjct: 307 AVADLQTVMERLSSSSEELAAQVEQSSRGAEEQARRVAETATAIEEMNATVLEVARNAED 366

Query: 414 SLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGISNV 473
           + +   +     E+    V+E++ A++ ++  A E   +MA +E+ +  I +I+  IS++
Sbjct: 367 AAQHANQARKEAEQGADIVNEVVAAMSGTSAKAGELKEDMAGLEQQAMAIGRIMTVISDI 426

Query: 474 SIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQINIV 533
           + QT +LA+N A+EAARAGE G+GFAVV+ +++ LA        ++   +K IQ    + 
Sbjct: 427 ADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMHATHEVGAAIKGIQTGTELS 486

Query: 534 RKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIADARAGM 593
                D++  +   + K   + + L+        +V   +  +    GI  + +   A  
Sbjct: 487 IHAADDVVGRIGTLSHKVRASGEALNR-------IVAAVQAATGEVSGIATASSQQSAAS 539

Query: 594 QQIATAAEESSHATGEAATAARQQSSSTSELASAIENIAAVADELQS 640
            +IA + E+ +  + E A A RQ S + +ELAS  +N+  +   + +
Sbjct: 540 DEIAHSVEDINRISSETAEAMRQSSIAVTELASQAQNLEGLISRMNA 586