Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 771 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  123 bits (309), Expect = 3e-32
 Identities = 105/335 (31%), Positives = 168/335 (50%), Gaps = 43/335 (12%)

Query: 40  TLARKQQAA-----ERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQSE 94
           T AR+QQA      +R+  A  +     +  S A   L   ++Q A G++     T ++ 
Sbjct: 472 TEARRQQAFIAEQNKRIGEAATQAETVSQNLSEAAATLEGQIDQAARGSDIQRQRTAEAA 531

Query: 95  TAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRMI 154
           TA+ QMN  + E A  A  + +          + A+ +++ V  ++ + +  +   + M 
Sbjct: 532 TAMEQMNASVMEVARNAAGAAEQAETARHKAQEGASALDDSVRTIREAKQLADTLREHMG 591

Query: 155 ELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEK 214
           EL +QA  I   +  +  IADQTNLLALNAAIEA RAG+ G+GFAVVAD VR LAEK   
Sbjct: 592 ELGKQAEDIGRVLDVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMN 651

Query: 215 NAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKG-HVVNKQLTLIRNEMVDLVKDSE 273
               +++ IK I   A   SN    +++KA   ++ G  +V K   ++R E+V LV+ + 
Sbjct: 652 ATREVDTAIKGIQTSAR--SN--IDNTRKATDAIEVGTGMVGKSGEILR-EIVRLVETT- 705

Query: 274 VLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSLDQ-QQIALDGAVTAAQSLD 332
                AD +            +++ A++EQSAA E+  +S D+  +IA + A    QS  
Sbjct: 706 -----ADSV-----------RNIATASEEQSAASEQITRSTDEINRIASETADAMQQS-- 747

Query: 333 ELTDELRTSTDIVKSSEEVAAAAEELSAGIEEINR 367
                        ++ ++VA+ A+EL   IEE+ R
Sbjct: 748 ------------ARAVQDVASLADELHGVIEEMRR 770



 Score =  105 bits (261), Expect = 1e-26
 Identities = 66/309 (21%), Positives = 149/309 (48%), Gaps = 14/309 (4%)

Query: 333 ELTDELRTSTDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVET 392
           ++T+  R    I + ++ +  AA +     + ++ ++  + G ++Q + G+    +    
Sbjct: 470 DVTEARRQQAFIAEQNKRIGEAATQAETVSQNLSEAAATLEGQIDQAARGSDIQRQRTAE 529

Query: 393 GITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNE 452
             T++ Q+          A  + +  E      +E  + +D+ +  I E+ + A      
Sbjct: 530 AATAMEQMNASVMEVARNAAGAAEQAETARHKAQEGASALDDSVRTIREAKQLADTLREH 589

Query: 453 MANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDA 512
           M  + + +  I +++D I++++ QT +LA+N A+EAARAGE G+GFAVV+ +++ LA   
Sbjct: 590 MGELGKQAEDIGRVLDVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKT 649

Query: 513 AENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGS 572
                ++   +K IQ               + ++  +KA   I+    +  +  +++   
Sbjct: 650 MNATREVDTAIKGIQTSAR-----------SNIDNTRKATDAIEVGTGMVGKSGEILREI 698

Query: 573 KRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIA 632
            R+ E+     R+IA A    ++ + A+E+ + +T E    A + + +  + A A++++A
Sbjct: 699 VRLVETTADSVRNIATA---SEEQSAASEQITRSTDEINRIASETADAMQQSARAVQDVA 755

Query: 633 AVADELQSI 641
           ++ADEL  +
Sbjct: 756 SLADELHGV 764