Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., Positive regulator of CheA protein activity (CheW) from Xanthomonas campestris pv. campestris strain 8004

 Score = 69.7 bits (169), Expect = 7e-17
 Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 10/153 (6%)

Query: 370 QLVIFKLDKEEFGISIHTVQEII--RIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKR 427
           Q + F L  E FG+ I  ++EII  RIP  +  +P     + GVINLRG V+P++D++ R
Sbjct: 19  QYLTFLLGGEMFGLGILGIKEIIEYRIPTEVPMMPPA---LRGVINLRGAVVPVMDVQLR 75

Query: 428 FHLPEMARHERQRILVVNF----EKISTGFIVDSVSEVLRIPESQLEDAPVLSEE-QAQL 482
           F     A  +R  I++V      E+   G +VD+VSEV+ I  + + DAP          
Sbjct: 76  FGRSASAITKRSCIVIVEIARAGEQQVLGLLVDAVSEVVEIAPADIADAPSFGAGIHRDF 135

Query: 483 MRQMVNLSPRMIGVLSADQLISNTEMYKLHMAA 515
           +  M     R + +L AD +++N    +L  AA
Sbjct: 136 IHGMAKRDERFVILLDADAVLANDAPAQLPDAA 168



 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           QY+ F+LG E+F L +  ++EII       VP+ P  L G+ NLRG ++PV+ ++     
Sbjct: 19  QYLTFLLGGEMFGLGILGIKEIIEYRIPTEVPMMPPALRGVINLRGAVVPVMDVQLRFGR 78

Query: 79  DRTSATEATRVIVITIGKT----KIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITN 134
             ++ T+ + ++++ I +      +G  VD V  V    P  I    + G  I    I  
Sbjct: 79  SASAITKRSCIVIVEIARAGEQQVLGLLVDAVSEVVEIAPADIADAPSFGAGIHRDFIHG 138

Query: 135 TIHSDNQIIQVLNCHRLLDNSVEEEL 160
               D + + +L+   +L N    +L
Sbjct: 139 MAKRDERFVILLDADAVLANDAPAQL 164



 Score = 52.8 bits (125), Expect = 9e-12
 Identities = 32/111 (28%), Positives = 68/111 (61%), Gaps = 7/111 (6%)

Query: 191 RQLVCCMVDGQEYAFPLEDTQEIV--RIPEIITKVPLTESAILGVINLRGKTLPLVSLRT 248
           +Q +  ++ G+ +   +   +EI+  RIP   T+VP+   A+ GVINLRG  +P++ ++ 
Sbjct: 18  QQYLTFLLGGEMFGLGILGIKEIIEYRIP---TEVPMMPPALRGVINLRGAVVPVMDVQL 74

Query: 249 LFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRL-HVDVMDS 298
            FG  + + +    +++V I+ + ++++ +G++VDAV EV+ +   D+ D+
Sbjct: 75  RFGRSASAITKRSCIVIVEIARAGEQQV-LGLLVDAVSEVVEIAPADIADA 124