Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., CheW-like protein from Pseudomonas syringae pv. syringae B728a

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 51/144 (35%), Positives = 94/144 (65%), Gaps = 2/144 (1%)

Query: 369 MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRF 428
           +Q V F+LD E +GI++  VQE++R  E I+ VP    ++ G+INLRGNV+ ++D R+RF
Sbjct: 14  LQWVTFRLDNESYGINVMQVQEVLRYTE-IAPVPGAPSYVLGIINLRGNVVTVIDTRQRF 72

Query: 429 HLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQLMRQMV 487
            L  +   +  RI+++  +K   G +VDSV+EV+ + +S++E AP V ++E A+ ++ + 
Sbjct: 73  GLAPVEVSDNTRIVIIEADKQVVGILVDSVAEVVYLRQSEVETAPNVGNDESAKFIQGVC 132

Query: 488 NLSPRMIGVLSADQLISNTEMYKL 511
           N +  ++ ++  D+++S  E  +L
Sbjct: 133 NKNGELLILVELDKMMSEEEWSEL 156



 Score = 70.5 bits (171), Expect = 4e-17
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 7/131 (5%)

Query: 187 DEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSL 246
           ++ + Q V   +D + Y   +   QE++R  EI   VP   S +LG+INLRG  + ++  
Sbjct: 10  EDPILQWVTFRLDNESYGINVMQVQEVLRYTEI-APVPGAPSYVLGIINLRGNVVTVIDT 68

Query: 247 RTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM 306
           R  FGL  +  SD+ R++++     E ++  VG++VD+V EV+ L    +++ P +    
Sbjct: 69  RQRFGLAPVEVSDNTRIVII-----EADKQVVGILVDSVAEVVYLRQSEVETAPNV-GND 122

Query: 307 GQANDISAICN 317
             A  I  +CN
Sbjct: 123 ESAKFIQGVCN 133



 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 35/148 (23%), Positives = 72/148 (48%)

Query: 14  EENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLR 73
           E+ + Q+V F L +E + +++ +V+E++R      VP  PSY++G+ NLRG ++ V+  R
Sbjct: 10  EDPILQWVTFRLDNESYGINVMQVQEVLRYTEIAPVPGAPSYVLGIINLRGNVVTVIDTR 69

Query: 74  TLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLIT 133
               +     ++ TR+++I   K  +G  VD V  V       ++     G       I 
Sbjct: 70  QRFGLAPVEVSDNTRIVIIEADKQVVGILVDSVAEVVYLRQSEVETAPNVGNDESAKFIQ 129

Query: 134 NTIHSDNQIIQVLNCHRLLDNSVEEELE 161
              + + +++ ++   +++      ELE
Sbjct: 130 GVCNKNGELLILVELDKMMSEEEWSELE 157