Pairwise Alignments
Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056
Subject, 492 a.a., CheW-like protein from Pseudomonas syringae pv. syringae B728a
Score = 80.1 bits (196), Expect = 2e-19
Identities = 84/346 (24%), Positives = 151/346 (43%), Gaps = 32/346 (9%)
Query: 3 SEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNL 62
++ L D L + L Y+ F F + V E++ P + G++++
Sbjct: 153 AQVLKDEALAAKNRLLHYLVFECDGRNFCIDASVVTELVDEPEITASDFASDCCFGVTSV 212
Query: 63 RGQILPVLCLRTLLCMDRTSATEATRVIVITIGKTKI-GFTVDRVVNVATPDPEMIKPTN 121
RG +P L L +L +D T +++++T ++ GF DR+V + DP+ +
Sbjct: 213 RGTKVPALNLSEVLGLDHQRQTSKPQLLLLTAPDGRVCGFGYDRMVAIQRQDPDSLLAA- 271
Query: 122 TAGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEELELSTQRFNHLSSQSHFGDVID 181
G P L+ ++ + +L H +L E++ TQ + H DV
Sbjct: 272 PGYGLPHPELLAGVMNLEEGQQALLLDHPMLLQ--RPEVKSYTQVYQH--------DVKP 321
Query: 182 EERDDD--EDMRQLVCCMVDGQ-EYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRG 238
+ D + M + C + D + PL EI+ +P+ + + E+ +LG NLRG
Sbjct: 322 AQASHDVTKAMLRHACLLFDAPTRFVAPLSQIVEIMSMPQQLIGLSQPETHLLGQFNLRG 381
Query: 239 KTLPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDS 298
+ +PL+ L +L G + ++ RVL+V ERL G V+ VD +D+
Sbjct: 382 EQVPLICLSSLLGEGAQVQGEASRVLIV-----RGERLCFGFAVN--------RVDAIDA 428
Query: 299 V----PEIMSKMGQANDISAICNLDDGRRTLSVISVEQLFDAQIVD 340
P ++ + QA+ I D R +SV S E+ + A ++D
Sbjct: 429 FNQFDPAMLEQGWQASTGKGISVNDRVRSLVSVGSQERSWRATLLD 474
Score = 64.3 bits (155), Expect = 1e-14
Identities = 80/416 (19%), Positives = 164/416 (39%), Gaps = 31/416 (7%)
Query: 50 PLTPSYLIGLSNLRGQILPVLCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNV 109
PLT L G+ LRG+ +P++ LR L ++ V ++ G +G +D V ++
Sbjct: 38 PLTRGALRGVFTLRGKPVPLVDLRAQLAEGGDMSSPTPLVAILKYGGGYLGLAIDAVCDI 97
Query: 110 ATPDPEMIKPTNTAGGKID--PTLITNTIHSDNQIIQVLNCHRLLDNSVEEELELSTQRF 167
P G + P+L+ + ++++I L +L +
Sbjct: 98 LKARDSQFSPLGPEGSAVGLLPSLLLGS--EESRMIYKL------------DLAFMSGLP 143
Query: 168 NHLSSQSHFGDVI-DEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLT 226
L + V+ DE + + DG+ + E+V PEI T
Sbjct: 144 GVLFAADPNAQVLKDEALAAKNRLLHYLVFECDGRNFCIDASVVTELVDEPEI-TASDFA 202
Query: 227 ESAILGVINLRGKTLPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVR 286
GV ++RG +P ++L + GL + ++L+ L+ + G D +
Sbjct: 203 SDCCFGVTSVRGTKVPALNLSEVLGLDHQRQTSKPQLLL----LTAPDGRVCGFGYDRMV 258
Query: 287 EVIRLHVDVMDSVPEIMSKMGQANDISAICNLDDGRRTLSVISVEQLFDAQIVDQFSEAY 346
+ R D + + P + ++ + NL++G++ L ++ L V +++ Y
Sbjct: 259 AIQRQDPDSLLAAPGY--GLPHPELLAGVMNLEEGQQAL-LLDHPMLLQRPEVKSYTQVY 315
Query: 347 PQEGTDMSTIDDVSILEDDNTDMQLVIFKLDKE-EFGISIHTVQEIIRIPENISRVPKTD 405
+ DV+ ++ D F + + EI+ +P+ + + + +
Sbjct: 316 QHDVKPAQASHDVT-----KAMLRHACLLFDAPTRFVAPLSQIVEIMSMPQQLIGLSQPE 370
Query: 406 DFIEGVINLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEV 461
+ G NLRG +P++ + + E R+L+V E++ GF V+ V +
Sbjct: 371 THLLGQFNLRGEQVPLICLSSLLGEGAQVQGEASRVLIVRGERLCFGFAVNRVDAI 426
Score = 51.2 bits (121), Expect = 9e-11
Identities = 66/298 (22%), Positives = 120/298 (40%), Gaps = 27/298 (9%)
Query: 198 VDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSISF 257
++G A + E V P + PLT A+ GV LRGK +PLV LR
Sbjct: 12 INGVYLAVVADALMEAVHWPADLNPHPLTRGALRGVFTLRGKPVPLVDLRAQLAEGGDMS 71
Query: 258 SDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDISAICN 317
S + V ++ +G+ +DAV ++++ DS + G A +
Sbjct: 72 SPTPLVAILKYGGGY-----LGLAIDAVCDILK----ARDSQFSPLGPEGSAVGLLP--- 119
Query: 318 LDDGRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVSILEDD-----NTDMQLV 372
+L + S E ++ F P G + + +L+D+ N + +
Sbjct: 120 ------SLLLGSEESRMIYKLDLAFMSGLP--GVLFAADPNAQVLKDEALAAKNRLLHYL 171
Query: 373 IFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFHLPE 432
+F+ D F I V E++ PE I+ D GV ++RG +P +++ + L
Sbjct: 172 VFECDGRNFCIDASVVTELVDEPE-ITASDFASDCCFGVTSVRGTKVPALNLSEVLGLDH 230
Query: 433 MARHERQRILVVNF-EKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQAQLMRQMVNL 489
+ + ++L++ + GF D + + R L AP +L+ ++NL
Sbjct: 231 QRQTSKPQLLLLTAPDGRVCGFGYDRMVAIQRQDPDSLLAAPGYGLPHPELLAGVMNL 288