Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., CheW-like protein from Pseudomonas syringae pv. syringae B728a

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 7/157 (4%)

Query: 368 DMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKR 427
           + Q + F L  E F I I  ++EII    +++ VP    F+ GVINLRG V+P+VD+  R
Sbjct: 17  EAQYLTFMLGGEMFAIGILGIKEIIEYG-SLTVVPMMPAFVRGVINLRGAVVPVVDLSAR 75

Query: 428 FHLPEMARHERQRILVV-----NFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEE-QAQ 481
           F     A   R  ++++     + +    G +VD+VS VL IP SQ+E  P      +A 
Sbjct: 76  FGRQNSAITRRSCVIIIEANSEDGQPQDIGLLVDNVSAVLEIPASQIEPPPNFGARIRAD 135

Query: 482 LMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAANDM 518
            +  M  +  + + VL  D+++S  EM  L  A   +
Sbjct: 136 FISGMAKVDGKFVIVLEVDRVLSIDEMSSLAEAGQSL 172



 Score = 69.7 bits (169), Expect = 8e-17
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 7/154 (4%)

Query: 15  ENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRT 74
           E   QY+ FMLG E+FA+ +  ++EII   +   VP+ P+++ G+ NLRG ++PV+ L  
Sbjct: 15  EEEAQYLTFMLGGEMFAIGILGIKEIIEYGSLTVVPMMPAFVRGVINLRGAVVPVVDLSA 74

Query: 75  LLCMDRTSATEATRVIVITIGK-----TKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDP 129
                 ++ T  + VI+I           IG  VD V  V       I+P    G +I  
Sbjct: 75  RFGRQNSAITRRSCVIIIEANSEDGQPQDIGLLVDNVSAVLEIPASQIEPPPNFGARIRA 134

Query: 130 TLITNTIHSDNQIIQVLNCHRLLDNSVEEELELS 163
             I+     D + + VL   R+L  S++E   L+
Sbjct: 135 DFISGMAKVDGKFVIVLEVDRVL--SIDEMSSLA 166



 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 37/158 (23%), Positives = 82/158 (51%), Gaps = 4/158 (2%)

Query: 188 EDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLR 247
           E+  Q +  M+ G+ +A  +   +EI+    + T VP+  + + GVINLRG  +P+V L 
Sbjct: 15  EEEAQYLTFMLGGEMFAIGILGIKEIIEYGSL-TVVPMMPAFVRGVINLRGAVVPVVDLS 73

Query: 248 TLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMG 307
             FG  + + +    V+++  +  + +   +G++VD V  V+ +    ++  P   +++ 
Sbjct: 74  ARFGRQNSAITRRSCVIIIEANSEDGQPQDIGLLVDNVSAVLEIPASQIEPPPNFGARI- 132

Query: 308 QANDISAICNLDDGRRTLSVISVEQLFDAQIVDQFSEA 345
           +A+ IS +  +D   + + V+ V+++     +   +EA
Sbjct: 133 RADFISGMAKVDG--KFVIVLEVDRVLSIDEMSSLAEA 168