Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., putative chemotaxis protein CheW from Phaeobacter inhibens DSM 17395

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 34/140 (24%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 8   DNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQIL 67
           D+E++H ++ +++V+F +  + F L + ++ EI R      +P  P+ ++G+ NLRG ++
Sbjct: 11  DSEIKHAQH-SEFVSFTVAGQAFCLKITQIREIRRWSPVTILPHAPADVLGVMNLRGAVI 69

Query: 68  PVLCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKI 127
           P+  L     + +T A+E   VIV+++    +G   + V  + + +P+ I+ T     + 
Sbjct: 70  PIYDLSARFGLQQTEASERNVVIVVSVHGKPVGLLAESVSEIISINPDDIQDTPPVDSRN 129

Query: 128 DPTLITNTIHSDNQIIQVLN 147
               I   I  D  +++++N
Sbjct: 130 TMDYIQGIISHDETMVRIIN 149



 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 2/139 (1%)

Query: 370 QLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFH 429
           + V F +  + F + I  ++EI R    ++ +P     + GV+NLRG V+PI D+  RF 
Sbjct: 21  EFVSFTVAGQAFCLKITQIREIRRWSP-VTILPHAPADVLGVMNLRGAVIPIYDLSARFG 79

Query: 430 LPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDA-PVLSEEQAQLMRQMVN 488
           L +    ER  ++VV+      G + +SVSE++ I    ++D  PV S      ++ +++
Sbjct: 80  LQQTEASERNVVIVVSVHGKPVGLLAESVSEIISINPDDIQDTPPVDSRNTMDYIQGIIS 139

Query: 489 LSPRMIGVLSADQLISNTE 507
               M+ +++ D +I+  E
Sbjct: 140 HDETMVRIINLDAVITVPE 158



 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 11/129 (8%)

Query: 182 EERDDDEDMR-----QLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINL 236
           E + DD +++     + V   V GQ +   +   +EI R   + T +P   + +LGV+NL
Sbjct: 6   EAKYDDSEIKHAQHSEFVSFTVAGQAFCLKITQIREIRRWSPV-TILPHAPADVLGVMNL 64

Query: 237 RGKTLPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVM 296
           RG  +P+  L   FGL     S+ + V+VV++        PVG++ ++V E+I ++ D +
Sbjct: 65  RGAVIPIYDLSARFGLQQTEASERNVVIVVSV-----HGKPVGLLAESVSEIISINPDDI 119

Query: 297 DSVPEIMSK 305
              P + S+
Sbjct: 120 QDTPPVDSR 128