Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 6/144 (4%)

Query: 370 QLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFH 429
           Q + F L +E F + I TV+E++ +   I+R+P+T +F+ GVINLRG  +P++++R++F 
Sbjct: 6   QYLTFTLGEEVFALDIGTVREVLELTA-ITRIPRTPEFMRGVINLRGRAVPVLELRRKFG 64

Query: 430 LPEMARHERQRILVVNF----EKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQAQ-LMR 484
           +          I++V      E    G +VDSV EV+ IP   +E AP +     Q  ++
Sbjct: 65  MEPTTDTVNTCIIIVEAELEGEAAVIGTLVDSVREVIEIPSDAIEPAPRMGTAVRQDFIK 124

Query: 485 QMVNLSPRMIGVLSADQLISNTEM 508
            M + +   + +L  +++ S  E+
Sbjct: 125 GMGHRNDGFVIILDGNRIFSVEEL 148



 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 6/145 (4%)

Query: 18  TQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLC 77
           +QY+ F LG+E+FAL +  V E++ L     +P TP ++ G+ NLRG+ +PVL LR    
Sbjct: 5   SQYLTFTLGEEVFALDIGTVREVLELTAITRIPRTPEFMRGVINLRGRAVPVLELRRKFG 64

Query: 78  MDRTSATEATRVIVITI----GKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLIT 133
           M+ T+ T  T +I++          IG  VD V  V     + I+P    G  +    I 
Sbjct: 65  MEPTTDTVNTCIIIVEAELEGEAAVIGTLVDSVREVIEIPSDAIEPAPRMGTAVRQDFIK 124

Query: 134 NTIHSDNQIIQVLNCHRLLDNSVEE 158
              H ++  + +L+ +R+   SVEE
Sbjct: 125 GMGHRNDGFVIILDGNRIF--SVEE 147



 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 16/143 (11%)

Query: 200 GQE-YAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSISFS 258
           G+E +A  +   +E++ +  I T++P T   + GVINLRG+ +P++ LR  FG+   + +
Sbjct: 13  GEEVFALDIGTVREVLELTAI-TRIPRTPEFMRGVINLRGRAVPVLELRRKFGMEPTTDT 71

Query: 259 DSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVP--------EIMSKMGQAN 310
            +  +++V   L E E   +G +VD+VREVI +  D ++  P        + +  MG  N
Sbjct: 72  VNTCIIIVEAEL-EGEAAVIGTLVDSVREVIEIPSDAIEPAPRMGTAVRQDFIKGMGHRN 130

Query: 311 DISAICNLDDGRRTLSVISVEQL 333
           D   I  + DG R   + SVE+L
Sbjct: 131 DGFVI--ILDGNR---IFSVEEL 148