Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  116 bits (290), Expect = 7e-31
 Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 2/144 (1%)

Query: 365 DNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDM 424
           D   +QLV F L +EEFG+ I  VQEIIR+   ++RVP    F+EG+INLRG V+P++DM
Sbjct: 14  DGMLLQLVTFTLGEEEFGVDILRVQEIIRMMP-VTRVPAAPSFVEGIINLRGKVIPVIDM 72

Query: 425 RKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQLM 483
           R RF L   A  E+ RI+VV  E    GFIVDSVS+VLR+P S +E  P V+    +  +
Sbjct: 73  RARFGLRAGAADEKTRIMVVEMEGRVAGFIVDSVSQVLRLPASTVEAPPAVIEGGGSDFI 132

Query: 484 RQMVNLSPRMIGVLSADQLISNTE 507
           R +  L  R++ +L  D L+  TE
Sbjct: 133 RGVGKLEGRLLLLLDLDLLLGETE 156



 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 36/93 (38%), Positives = 55/93 (59%)

Query: 17  LTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLL 76
           L Q V F LG+E F + +  V+EIIR+     VP  PS++ G+ NLRG+++PV+ +R   
Sbjct: 17  LLQLVTFTLGEEEFGVDILRVQEIIRMMPVTRVPAAPSFVEGIINLRGKVIPVIDMRARF 76

Query: 77  CMDRTSATEATRVIVITIGKTKIGFTVDRVVNV 109
            +   +A E TR++V+ +     GF VD V  V
Sbjct: 77  GLRAGAADEKTRIMVVEMEGRVAGFIVDSVSQV 109



 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 6/121 (4%)

Query: 187 DEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSL 246
           D  + QLV   +  +E+   +   QEI+R+  + T+VP   S + G+INLRGK +P++ +
Sbjct: 14  DGMLLQLVTFTLGEEEFGVDILRVQEIIRMMPV-TRVPAAPSFVEGIINLRGKVIPVIDM 72

Query: 247 RTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM 306
           R  FGL + +  +  R++VV     E E    G +VD+V +V+RL    +++ P ++   
Sbjct: 73  RARFGLRAGAADEKTRIMVV-----EMEGRVAGFIVDSVSQVLRLPASTVEAPPAVIEGG 127

Query: 307 G 307
           G
Sbjct: 128 G 128