Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., purine-binding chemotaxis protein CheW from Marinobacter adhaerens HP15

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 52/144 (36%), Positives = 92/144 (63%), Gaps = 2/144 (1%)

Query: 365 DNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDM 424
           D+  +Q V F+LD E +G+++  +QE++R  E I+ VP   D++ G+INLRGNV+ ++D 
Sbjct: 13  DDQVLQYVTFRLDDETYGLNVMQIQEVLRYTE-IAPVPGAPDYVLGIINLRGNVVTVIDT 71

Query: 425 RKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQLM 483
           R+RF L +    +  RI+V+       G +VDSV+EV+ +  S++E AP V +EE A+ +
Sbjct: 72  RRRFGLADAEVTDATRIVVMESANQVMGILVDSVAEVVYLKASEIETAPNVGNEESAKFI 131

Query: 484 RQMVNLSPRMIGVLSADQLISNTE 507
           + + N    +I ++  D+++S+ E
Sbjct: 132 QGVCNKDGELIILVEFDKMLSDHE 155



 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 37/141 (26%), Positives = 70/141 (49%)

Query: 14  EENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLR 73
           ++ + QYV F L DE + L++ +++E++R      VP  P Y++G+ NLRG ++ V+  R
Sbjct: 13  DDQVLQYVTFRLDDETYGLNVMQIQEVLRYTEIAPVPGAPDYVLGIINLRGNVVTVIDTR 72

Query: 74  TLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLIT 133
               +     T+ATR++V+      +G  VD V  V       I+     G +     I 
Sbjct: 73  RRFGLADAEVTDATRIVVMESANQVMGILVDSVAEVVYLKASEIETAPNVGNEESAKFIQ 132

Query: 134 NTIHSDNQIIQVLNCHRLLDN 154
              + D ++I ++   ++L +
Sbjct: 133 GVCNKDGELIILVEFDKMLSD 153



 Score = 67.4 bits (163), Expect = 3e-16
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)

Query: 187 DEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSL 246
           D+ + Q V   +D + Y   +   QE++R  EI   VP     +LG+INLRG  + ++  
Sbjct: 13  DDQVLQYVTFRLDDETYGLNVMQIQEVLRYTEI-APVPGAPDYVLGIINLRGNVVTVIDT 71

Query: 247 RTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM 306
           R  FGL     +D+ R++V+     E     +G++VD+V EV+ L    +++ P + ++ 
Sbjct: 72  RRRFGLADAEVTDATRIVVM-----ESANQVMGILVDSVAEVVYLKASEIETAPNVGNE- 125

Query: 307 GQANDISAICNLD 319
             A  I  +CN D
Sbjct: 126 ESAKFIQGVCNKD 138