Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., chemotaxis protein CheW (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 370 QLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFH 429
           Q + F L  E F + I TV+E++ +   ++R+P+T +F+ GVINLRG  +P++++R++F 
Sbjct: 6   QYLTFTLGGEVFALDIGTVREVLELT-TVTRIPRTPEFMRGVINLRGRAVPVLELRRKFQ 64

Query: 430 LPEMARHERQRILVV----NFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQAQ-LMR 484
           +P  A      I++V    + E    G +VDSV EV+ IP + +E AP L     Q  +R
Sbjct: 65  MPVAADTVNTCIIIVEALLDDEPAIIGALVDSVREVVEIPATSIEAAPRLGTAIRQDFIR 124

Query: 485 QMVNLSPRMIGVLSADQLISNTEM 508
            M       + +L  +++ S  E+
Sbjct: 125 GMGRQHEGFVIILDGNRIFSVDEL 148



 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 41/166 (24%), Positives = 84/166 (50%), Gaps = 10/166 (6%)

Query: 192 QLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFG 251
           Q +   + G+ +A  +   +E++ +  + T++P T   + GVINLRG+ +P++ LR  F 
Sbjct: 6   QYLTFTLGGEVFALDIGTVREVLELTTV-TRIPRTPEFMRGVINLRGRAVPVLELRRKFQ 64

Query: 252 LPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM----- 306
           +P  + + +  +++V   L ++  + +G +VD+VREV+ +    +++ P + + +     
Sbjct: 65  MPVAADTVNTCIIIVEALLDDEPAI-IGALVDSVREVVEIPATSIEAAPRLGTAIRQDFI 123

Query: 307 -GQANDISAICNLDDGRRTLSVISVEQLFDAQIVD--QFSEAYPQE 349
            G          + DG R  SV  +    +A ++D    S A P E
Sbjct: 124 RGMGRQHEGFVIILDGNRIFSVDELTAAGEAAVLDAAPSSSAMPVE 169



 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 6/144 (4%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           QY+ F LG E+FAL +  V E++ L T   +P TP ++ G+ NLRG+ +PVL LR    M
Sbjct: 6   QYLTFTLGGEVFALDIGTVREVLELTTVTRIPRTPEFMRGVINLRGRAVPVLELRRKFQM 65

Query: 79  DRTSATEATRVIVITI----GKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITN 134
              + T  T +I++          IG  VD V  V       I+     G  I    I  
Sbjct: 66  PVAADTVNTCIIIVEALLDDEPAIIGALVDSVREVVEIPATSIEAAPRLGTAIRQDFIRG 125

Query: 135 TIHSDNQIIQVLNCHRLLDNSVEE 158
                   + +L+ +R+   SV+E
Sbjct: 126 MGRQHEGFVIILDGNRIF--SVDE 147