Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., chemotaxis protein CheW (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  121 bits (303), Expect = 2e-32
 Identities = 64/145 (44%), Positives = 98/145 (67%), Gaps = 2/145 (1%)

Query: 365 DNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDM 424
           D+  +QLV F + +EEFG+ I  VQEIIR  E I++VP+  +F+EGVINLRG V+PI+D+
Sbjct: 9   DDELLQLVTFSIGEEEFGVDILKVQEIIRTME-ITKVPRAPEFVEGVINLRGKVIPIIDL 67

Query: 425 RKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLE-DAPVLSEEQAQLM 483
           R+RF L      +  RI+V+    +  GF+VDSVSEVLRIP S +E   PV++  +++ +
Sbjct: 68  RRRFGLDSKTHDKHTRIIVIEINNMIVGFVVDSVSEVLRIPASTVEPPPPVVAGLESEYI 127

Query: 484 RQMVNLSPRMIGVLSADQLISNTEM 508
             +  L  R++ +L  D+L+SN ++
Sbjct: 128 SGVGKLQDRLLILLDLDRLLSNDDI 152



 Score = 82.8 bits (203), Expect = 8e-21
 Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 10/163 (6%)

Query: 182 EERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTL 241
           ++R DDE + QLV   +  +E+   +   QEI+R  EI TKVP     + GVINLRGK +
Sbjct: 5   QKRQDDE-LLQLVTFSIGEEEFGVDILKVQEIIRTMEI-TKVPRAPEFVEGVINLRGKVI 62

Query: 242 PLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPE 301
           P++ LR  FGL S +     R++V+ I+      + VG VVD+V EV+R+    ++  P 
Sbjct: 63  PIIDLRRRFGLDSKTHDKHTRIIVIEIN-----NMIVGFVVDSVSEVLRIPASTVEPPPP 117

Query: 302 IMSKMGQANDISAICNLDDGRRTLSVISVEQLFDAQIVDQFSE 344
           +++ + ++  IS +  L D  R L ++ +++L     +   S+
Sbjct: 118 VVAGL-ESEYISGVGKLQD--RLLILLDLDRLLSNDDIGAISQ 157



 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 43/141 (30%), Positives = 75/141 (53%)

Query: 14  EENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLR 73
           ++ L Q V F +G+E F + + +V+EIIR      VP  P ++ G+ NLRG+++P++ LR
Sbjct: 9   DDELLQLVTFSIGEEEFGVDILKVQEIIRTMEITKVPRAPEFVEGVINLRGKVIPIIDLR 68

Query: 74  TLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLIT 133
               +D  +  + TR+IVI I    +GF VD V  V       ++P       ++   I+
Sbjct: 69  RRFGLDSKTHDKHTRIIVIEINNMIVGFVVDSVSEVLRIPASTVEPPPPVVAGLESEYIS 128

Query: 134 NTIHSDNQIIQVLNCHRLLDN 154
                 ++++ +L+  RLL N
Sbjct: 129 GVGKLQDRLLILLDLDRLLSN 149