Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., chemotaxis protein CheW from Cupriavidus basilensis FW507-4G11

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 46/157 (29%), Positives = 85/157 (54%), Gaps = 2/157 (1%)

Query: 353 MSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVI 412
           M+ I  +     + +  + ++F L  EE+GI I  VQEI R  + ++R+    DFI+GV 
Sbjct: 1   MAGIGHIDTPGSEASGQEFLVFTLGSEEYGIDILKVQEI-RGYDAVTRLANAPDFIKGVT 59

Query: 413 NLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDA 472
           NLRG ++PIVD+R +F L  +       ++++N      G +VD VS+VL +    ++ A
Sbjct: 60  NLRGVIVPIVDLRLKFRLGNVRYDHHTVVIILNIAGRVVGIVVDGVSDVLTLTGEAIKPA 119

Query: 473 PVLSEEQA-QLMRQMVNLSPRMIGVLSADQLISNTEM 508
           P      +   +  +  +  RM+ ++  ++L+++ EM
Sbjct: 120 PEFGVSVSNDHLTGLGTVDGRMLILIDIEKLMTSAEM 156



 Score = 60.5 bits (145), Expect = 4e-14
 Identities = 37/143 (25%), Positives = 71/143 (49%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           +++ F LG E + + + +V+EI        +   P ++ G++NLRG I+P++ LR    +
Sbjct: 18  EFLVFTLGSEEYGIDILKVQEIRGYDAVTRLANAPDFIKGVTNLRGVIVPIVDLRLKFRL 77

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138
                   T VI++ I    +G  VD V +V T   E IKP    G  +    +T     
Sbjct: 78  GNVRYDHHTVVIILNIAGRVVGIVVDGVSDVLTLTGEAIKPAPEFGVSVSNDHLTGLGTV 137

Query: 139 DNQIIQVLNCHRLLDNSVEEELE 161
           D +++ +++  +L+ ++  E +E
Sbjct: 138 DGRMLILIDIEKLMTSAEMELVE 160



 Score = 52.8 bits (125), Expect = 9e-12
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 201 QEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSISFSDS 260
           +EY   +   QEI R  + +T++      I GV NLRG  +P+V LR  F L ++ +   
Sbjct: 27  EEYGIDILKVQEI-RGYDAVTRLANAPDFIKGVTNLRGVIVPIVDLRLKFRLGNVRYDHH 85

Query: 261 HRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDISAICNLDD 320
             V+++NI+        VG+VVD V +V+ L  + +   PE    +  +ND        D
Sbjct: 86  TVVIILNIA-----GRVVGIVVDGVSDVLTLTGEAIKPAPEF--GVSVSNDHLTGLGTVD 138

Query: 321 GRRTLSVISVEQL 333
           G R L +I +E+L
Sbjct: 139 G-RMLILIDIEKL 150