Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 151 a.a., chemotaxis protein cheW from Caulobacter crescentus NA1000

 Score = 79.7 bits (195), Expect = 6e-20
 Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 3/140 (2%)

Query: 365 DNTD--MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIV 422
           DNT   ++L+ F + ++EF I + TV+EI R     + +P   +++ GVINLRG ++P++
Sbjct: 4   DNTAPALELISFCIGEQEFCIDVKTVREI-RGWTPATPIPHAPNYMRGVINLRGAIMPVI 62

Query: 423 DMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQAQL 482
           D+R R  L       R  I+VV       G +VD+VSE   +P   L+ AP +  E+ + 
Sbjct: 63  DLRNRLGLGVTIPETRHVIVVVECRDRLAGILVDAVSETFTVPRDSLQPAPDVGVEELRY 122

Query: 483 MRQMVNLSPRMIGVLSADQL 502
           ++ ++++  R+I  L  D +
Sbjct: 123 IQAIISMENRLITYLRMDDV 142



 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 10/154 (6%)

Query: 185 DDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLV 244
           D+     +L+   +  QE+   ++  +EI R     T +P   + + GVINLRG  +P++
Sbjct: 4   DNTAPALELISFCIGEQEFCIDVKTVREI-RGWTPATPIPHAPNYMRGVINLRGAIMPVI 62

Query: 245 SLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMS 304
            LR   GL  ++  ++  V+VV   +  ++RL  G++VDAV E   +  D +   P++  
Sbjct: 63  DLRNRLGL-GVTIPETRHVIVV---VECRDRL-AGILVDAVSETFTVPRDSLQPAPDV-- 115

Query: 305 KMGQANDISAICNLDDGRRTLSVISVEQLFDAQI 338
            + +   I AI ++++  R ++ + ++ +F AQ+
Sbjct: 116 GVEELRYIQAIISMEN--RLITYLRMDDVFPAQV 147



 Score = 53.5 bits (127), Expect = 5e-12
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 1/140 (0%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           + ++F +G++ F + ++ V EI        +P  P+Y+ G+ NLRG I+PV+ LR  L +
Sbjct: 11  ELISFCIGEQEFCIDVKTVREIRGWTPATPIPHAPNYMRGVINLRGAIMPVIDLRNRLGL 70

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138
             T       ++V+       G  VD V    T   + ++P    G + +   I   I  
Sbjct: 71  GVTIPETRHVIVVVECRDRLAGILVDAVSETFTVPRDSLQPAPDVGVE-ELRYIQAIISM 129

Query: 139 DNQIIQVLNCHRLLDNSVEE 158
           +N++I  L    +    V E
Sbjct: 130 ENRLITYLRMDDVFPAQVSE 149