Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 155 a.a., chemotaxis protein cheW from Caulobacter crescentus NA1000

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 42/139 (30%), Positives = 80/139 (57%), Gaps = 2/139 (1%)

Query: 370 QLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFH 429
           +L+ F++ ++E+ + I  V+EI R     + +P++  ++ GVINLRG VLPI+D+  R  
Sbjct: 14  ELISFRVGEQEYCVDIMAVREI-RGWSPATTLPQSPGYMRGVINLRGAVLPIMDLACRLG 72

Query: 430 LPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQLMRQMVN 488
           +P +    R   +VV     + G +VD+VS++L I +  ++  P V  +     +R +++
Sbjct: 73  MPVIEPTVRSVFIVVKAGDRTVGLLVDAVSDILSINDDMIQPTPDVACDAVRSFVRGIIS 132

Query: 489 LSPRMIGVLSADQLISNTE 507
           +  RMI  +S D+++   E
Sbjct: 133 IEGRMISEISLDRILPERE 151



 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 34/134 (25%), Positives = 68/134 (50%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           + ++F +G++ + + +  V EI       ++P +P Y+ G+ NLRG +LP++ L   L M
Sbjct: 14  ELISFRVGEQEYCVDIMAVREIRGWSPATTLPQSPGYMRGVINLRGAVLPIMDLACRLGM 73

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138
                T  +  IV+  G   +G  VD V ++ + + +MI+PT         + +   I  
Sbjct: 74  PVIEPTVRSVFIVVKAGDRTVGLLVDAVSDILSINDDMIQPTPDVACDAVRSFVRGIISI 133

Query: 139 DNQIIQVLNCHRLL 152
           + ++I  ++  R+L
Sbjct: 134 EGRMISEISLDRIL 147



 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 6/122 (4%)

Query: 181 DEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKT 240
           D+      D R+L+   V  QEY   +   +EI R     T +P +   + GVINLRG  
Sbjct: 3   DQAAATSADRRELISFRVGEQEYCVDIMAVREI-RGWSPATTLPQSPGYMRGVINLRGAV 61

Query: 241 LPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVP 300
           LP++ L    G+P I    + R + + +   ++    VG++VDAV +++ ++ D++   P
Sbjct: 62  LPIMDLACRLGMPVI--EPTVRSVFIVVKAGDR---TVGLLVDAVSDILSINDDMIQPTP 116

Query: 301 EI 302
           ++
Sbjct: 117 DV 118