Pairwise Alignments
Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056
Subject, 170 a.a., CheW protein (RefSeq) from Shewanella sp. ANA-3
Score = 73.6 bits (179), Expect = 5e-18
Identities = 39/142 (27%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 368 DMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKR 427
+++ + F L +E + + I +V+EI R E ++++ FI+GV+NLRG+++PIVD+R +
Sbjct: 18 EVEFLSFVLGEEHYALDIMSVKEI-RGYEPVTKIANAPSFIKGVLNLRGDIVPIVDLRMK 76
Query: 428 FHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEE-QAQLMRQM 486
F + +E ++++N G +VD+VS+V+++ ++ AP ++ ++ +
Sbjct: 77 FAVGSATYNEFTIVIMLNVFDRIVGIVVDAVSDVIKLAAEEILPAPEFGVAFDSRYLKGL 136
Query: 487 VNLSPRMIGVLSADQLISNTEM 508
+ +MI +++ LIS+ E+
Sbjct: 137 ATVEDKMIILVNIQALISSDEL 158
Score = 65.1 bits (157), Expect = 2e-15
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 13 HEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCL 72
H+E ++++F+LG+E +AL + V+EI + PS++ G+ NLRG I+P++ L
Sbjct: 16 HDE--VEFLSFVLGEEHYALDIMSVKEIRGYEPVTKIANAPSFIKGVLNLRGDIVPIVDL 73
Query: 73 RTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLI 132
R + + E T VI++ + +G VD V +V E I P G D +
Sbjct: 74 RMKFAVGSATYNEFTIVIMLNVFDRIVGIVVDAVSDVIKLAAEEILPAPEFGVAFDSRYL 133
Query: 133 TNTIHSDNQIIQVLNCHRLLDNSVEEELELSTQRFNHLSSQ 173
++++I ++N L+ + EL N LS Q
Sbjct: 134 KGLATVEDKMIILVNIQALISSD-----ELGLIDANSLSDQ 169
Score = 57.4 bits (137), Expect = 4e-13
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 201 QEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSISFSDS 260
+ YA + +EI R E +TK+ S I GV+NLRG +P+V LR F + S ++++
Sbjct: 29 EHYALDIMSVKEI-RGYEPVTKIANAPSFIKGVLNLRGDIVPIVDLRMKFAVGSATYNEF 87
Query: 261 HRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPE 301
V+++N+ +R+ VG+VVDAV +VI+L + + PE
Sbjct: 88 TIVIMLNVF----DRI-VGIVVDAVSDVIKLAAEEILPAPE 123