Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  302 bits (774), Expect = 3e-86
 Identities = 219/760 (28%), Positives = 376/760 (49%), Gaps = 98/760 (12%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60
           ++   Q FI+E+R+ +++    LL LE +P D   I  +FR  HT+KG++G+   + P  
Sbjct: 5   LDQAQQTFIVEAREQLQAMEESLLQLETDPGDDDAIGAIFRAAHTIKGSAGLF-GLEPIV 63

Query: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIE-ELEQHQELSAEAVSISKQM 119
              H +ED++ ++R+G V ++  ++ ++L   D  L  I     Q   L   A+    ++
Sbjct: 64  SFTHIVEDVLDRLRNGSVEVDAGLIAVLLKSSDHMLELINVAANQGGALPPPALQREVEL 123

Query: 120 IAQLAPLTQAAPTHTPTPAVAAQ-EETATLSISELTELLGRDCFNDVEALLEHPDALLLI 178
              L      +P   PTPA   +  E     +  ++   G+D F +              
Sbjct: 124 CQILQEYQAPSPATAPTPAQNTETREPGETRLWHISLRFGQDVFRN-------------- 169

Query: 179 YTPDKQCFFSGDDPLAWMRSVEKVSWR-KVVLIPDSEPF-DTYQAQMQFLLLTQSAKKDL 236
                     G DPL+++R ++ +     +  + D+ P  D + A+  +L        D+
Sbjct: 170 ----------GMDPLSFLRYLQTLGEIVDITTLTDALPAADAWDAESCYLGF------DI 213

Query: 237 EQQLAPIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTFLS 296
           E + A   G                I++   +V    + +I + +++ ++     G    
Sbjct: 214 EFRSAAGHGA---------------INEVFDFVREDCEIEI-VAQDDDIAPQANTGL--- 254

Query: 297 IKNLYCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQPSAIT 356
                      ++  P P  E+ +      +    LLS   +T         P  P+ I 
Sbjct: 255 -----------VTTSPEPAEETTAL-----VATGELLSDQRKT---------PRMPAQIA 289

Query: 357 VNEQL--DKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQ 414
            ++Q      K K    ++V+ +K+D L++LVGEL++A      LA    N+        
Sbjct: 290 TDKQAVSSDSKAKDGTYVRVNADKLDELINLVGELVIASAGASLLARTCHND-------- 341

Query: 415 DIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTE 474
            ++   S +S L E++    +++RM+P+   F R+ R++RD+S++LGK +DLII G +TE
Sbjct: 342 PLQESTSTVSSLVEEILDGALRLRMIPIGETFNRFRRVVRDVSQELGKDIDLIISGAETE 401

Query: 475 ADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDD 534
            DK++VE + +PL+HL+RNA+DHGIE+ + R   GK   G + L+A+    S++++++DD
Sbjct: 402 LDKTVVEKIGDPLMHLLRNAMDHGIETAEARLAAGKPAKGHLHLNAYHDSGSIVLEIADD 461

Query: 535 GKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAV 594
           G G++ +R+  KA ERGLV  S     + QEI +LIFEPGFST + V++LSGRGVGMD V
Sbjct: 462 GAGLNRDRILEKAQERGLV--SPGASPTDQEIYNLIFEPGFSTAQAVTNLSGRGVGMDVV 519

Query: 595 RTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKIS 654
           +  I    GT+ L S+PGKG+ + + LPL++ I    +  + Q ++ IP++ V + +++S
Sbjct: 520 KRNITLLRGTVDLDSQPGKGTVVRIRLPLTLAIINGFLVGIGQSTYVIPLDMVQECIELS 579

Query: 655 RHKDI--RRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAV 712
            +  +  R    LD   LRGE +P++YL+  F           Q ++VVR  +   GL V
Sbjct: 580 ENDGVASREQGYLD---LRGEVLPLVYLRDHFSHEGPPARR--QNVVVVRYAELKAGLVV 634

Query: 713 DRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLD 752
           D L      +IKPL           G+ I+G G V L+LD
Sbjct: 635 DDLLGEFQTVIKPLGKLFGALRGISGSTILGSGAVALILD 674