Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  202 bits (514), Expect = 5e-56
 Identities = 108/335 (32%), Positives = 193/335 (57%), Gaps = 1/335 (0%)

Query: 424 SRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDL 483
           S+ A+ L    +  RM P A V     R++RD+ R L KQV L IEGE T+ D+ ++E L
Sbjct: 273 SQRAQVLYDTALACRMRPFADVLSGQARMVRDLGRSLDKQVRLEIEGEKTQVDRDVLEKL 332

Query: 484 SEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERV 543
             PL HL+RNA+DHGIE P+ R   GK   G I L A      ++++++DDG GVD+ERV
Sbjct: 333 EAPLTHLLRNAVDHGIEPPEQRILAGKPAEGVIRLRASHQAGLLVLELADDGAGVDLERV 392

Query: 544 KTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGG 603
           +   +ERGL        +S++E++  +F PGFS  ++V+++SGRGVG+DAV+  + +  G
Sbjct: 393 RRSIVERGLSPEQTAASLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRG 452

Query: 604 TLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVK 663
            + L    G+GS   + +PL++++ R ++ E+  +++A P+  + +   ++  +DI +V+
Sbjct: 453 AVVLEQTAGEGSRFHLEVPLTLSVVRSLVVEVGDEAYAFPLAHIERMCDLA-PEDIVQVE 511

Query: 664 NLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVII 723
               F   G  + ++   +     + Q       ++V+R  + + G+AV+R    + +++
Sbjct: 512 GRQHFWHEGRHIGLVAASQLLNRPATQGSNQTLKVVVIRERETIYGVAVERFIGERTLVV 571

Query: 724 KPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVK 758
            PL+  L         A++ DG V+L++D E++++
Sbjct: 572 LPLDERLGKVQDISAGALLDDGSVVLIVDVEDLLR 606



 Score = 43.5 bits (101), Expect = 4e-08
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 4  IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
          +++ F +E+   ++  + GLLALE +P     +    R  H++KGA+ I+  +     +A
Sbjct: 11 LLELFSLEAEAQVQVLSAGLLALERDPTQADYLESCMRAAHSLKGAARIV-GVDAGVSVA 69

Query: 64 HRMEDLMQKVRDGHVALNGTMLDLML 89
          H MED +   ++  + L    +D +L
Sbjct: 70 HVMEDCLVSAQEQRLVLGAEHIDALL 95