Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  283 bits (724), Expect = 2e-80
 Identities = 154/421 (36%), Positives = 258/421 (61%), Gaps = 22/421 (5%)

Query: 348 EPAQPSAIT-------VNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLA 400
           EPA+P+A              +K   +   T++VD  ++D +M++VGEL++ +N +  L 
Sbjct: 337 EPAKPAAAAPAPARAAAAAPAEKPASEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLG 396

Query: 401 YRAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKL 460
             +++E   + ++         +  +  DLQ+ VM+ RM P+  VF R+PRL+RD++R+L
Sbjct: 397 LNSQDEAMSKAVSN--------LDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQL 448

Query: 461 GKQVDLIIEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSA 520
            K+++L + GE+T+ DK++VE L++PLVHL+RNA+DHGIESP+ R   GK  +GK+ L+A
Sbjct: 449 KKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIESPEEREASGKVRSGKVILAA 508

Query: 521 FTLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQ 580
               D +++ +SDDGKG+D   +++ A++RG+++    +R+S  E  +LIF PGFST  +
Sbjct: 509 EQEGDHILLSISDDGKGMDPNVLRSIAVKRGVMDKDAADRLSDTECYNLIFAPGFSTKTE 568

Query: 581 VSDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSF 640
           +SD+SGRGVGMD V+T I +  G++ + S  G+GS+I + +PL++ I   +M  L  Q+F
Sbjct: 569 ISDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIVIKVPLTLAIMPTLMVMLGNQAF 628

Query: 641 AIPIESVIQTLKISRHKDIRRVKNLD---TFILRGETVPILYLKRAFEMNSAQIYPDIQP 697
           A P+ +V +      H D+ R   +D     I+R + +P+ YLKR    ++A +      
Sbjct: 629 AFPLVNVNEIF----HLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVSSAAHVEQGEGH 684

Query: 698 ILVVRVGDDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVV 757
           ++++ VG   +G  VD+L   ++V+IKPL   L       GA I GDGR+ L+LD   ++
Sbjct: 685 VVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSML 744

Query: 758 K 758
           K
Sbjct: 745 K 745



 Score = 76.6 bits (187), Expect = 4e-18
 Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 13/177 (7%)

Query: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
           I+Q+F++E+ +++E  +  L+ LE+ PDD  ++N +FR  HTVKG +G L  +    +  
Sbjct: 9   ILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFL-QLNELVECC 67

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123
           H  E++   +R G   ++  ++D++L   D       E+ +   ++A     + +++A L
Sbjct: 68  HIAENVFDILRKGERRVDSELMDVVLEALDAVNSMFSEVRERSPITA----ATPELLAAL 123

Query: 124 APLT------QAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDA 174
           A L       +AAP   P       E +  ++ +E  +LL  D  N V+A  E P A
Sbjct: 124 ARLAEPQSADEAAPVAEPAVEEPVAEASGDITDNEFEQLL--DSLNTVKAQAEAPVA 178