Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  281 bits (720), Expect = 6e-80
 Identities = 224/767 (29%), Positives = 375/767 (48%), Gaps = 89/767 (11%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60
           ++ +++ FI ES++L+      LL +E  PDD   IN LFR  HT+KG++G+     P  
Sbjct: 3   LDDVLRTFIAESQELLLLMEEALLQIEQAPDDVDTINALFRVAHTIKGSAGLF-GFTPIV 61

Query: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQH---QELSAEAVSISK 117
              H  E ++ +VR   + ++ ++  L L   D     IE L  H   Q ++AE   +  
Sbjct: 62  AFTHVAESVLDRVRGHELRVDESLSALFLEVRDHLCTLIELLASHGDLQGMTAEHELLGA 121

Query: 118 QMIAQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDALLL 177
            ++ +L    + +P   P  ++A  E   +  I      L R C          PD L  
Sbjct: 122 ALVERLNRYLEPSPE--PVQSLATFEPLQSTCIMHWHISL-RLC----------PDVLR- 167

Query: 178 IYTPDKQCFFSGDDPLAWMRSVEKVSWRKVVL-----IPDSEPFDTYQAQMQFLLLTQSA 232
                     +G DPL+ +R +        V+     +PD    D     + F L   S 
Sbjct: 168 ----------NGMDPLSLLRYLNSFGQISAVVCITEGMPDISAMDPETCYLGFELGFVS- 216

Query: 233 KKDLEQQLAPIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAG 292
             D +Q  A IEG +   R  S                     QI +L        +RA 
Sbjct: 217 --DADQ--ATIEGAFDFVREGS---------------------QICVLPCNGDLTGLRA- 250

Query: 293 TFLSIKNLYCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQP 352
                      L  ++   P  + E+  A   +T    +    +  +  I      P Q 
Sbjct: 251 -----------LIGRLDAEPDAMVEAFIACGSVTREAWLASPSSGESTAIAVAPVAPDQA 299

Query: 353 SA--ITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVR 410
           +   +T +    + +  +   ++VD  K+D L++LVGELI+A       A ++    G+ 
Sbjct: 300 AREDVTKSRGAKEARPAEGNLIRVDAGKLDQLINLVGELIIAGAGANLGAIQS----GIG 355

Query: 411 KLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEG 470
           +L +      S +SRL E+++   + +RMV +   F R+ R++RD+S++LGK + L + G
Sbjct: 356 ELIE----ATSSLSRLVEEVRDCALTLRMVQIGGTFNRFQRVVRDVSKELGKDIALQVLG 411

Query: 471 EDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIK 530
            +TE DK++VE + +PL HL+RNA+DHGIES  +RR++GK   G + L+A+   +S++I+
Sbjct: 412 AETELDKTVVERIGDPLTHLVRNAMDHGIESSQLRRDRGKPEQGTVRLNAYHEANSIVIE 471

Query: 531 MSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVG 590
           +SDDG G++ +R+  KA+ERGLV  ++ + ++  +I++LIFEPGFST +QVS+LSGRGVG
Sbjct: 472 VSDDGGGLNKQRILAKAMERGLV--AEGQSLADGDILNLIFEPGFSTADQVSNLSGRGVG 529

Query: 591 MDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQT 650
           MD V+  I    G++ L SE G G+ + + LPL++ I    +  +   S+ +P++ V + 
Sbjct: 530 MDVVKRNIVALRGSVNLESEEGVGTTVRIRLPLTLAIIDGFLIGVGNASYVVPLDLVEEC 589

Query: 651 LKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGL 710
           +++S         + D   LRG  +P+L L+  F ++        + I+VV      +GL
Sbjct: 590 IELSTDDG----SSQDFLDLRGSVLPVLRLREMFAIDEPN--HGRENIVVVHYAGMRVGL 643

Query: 711 AVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVV 757
            VD+L      +IKPL     T     G  I+G+G V L+LD  +++
Sbjct: 644 VVDQLLGEFQTVIKPLGKIFGTAHGLGGFTILGNGAVALILDIPKLL 690