Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 924 a.a., hybrid sensor histidine kinase/response regulator from Synechocystis sp000284455 PCC 6803

 Score =  191 bits (484), Expect = 2e-52
 Identities = 116/349 (33%), Positives = 192/349 (55%), Gaps = 22/349 (6%)

Query: 414 QDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDT 473
           +D++     +S+    L S + Q R+VP   + Q + + +  +  +  K V  +IEGE+T
Sbjct: 436 RDLQETLIQMSQSLHQLDSELTQSRLVPFRGLAQSFAQPLEKLGDRHKKPVQFVIEGENT 495

Query: 474 EADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSD 533
             + +I++ L  PL HLIRNA DHG+E    R+ QGK P G ITLSA T ++ V+I +SD
Sbjct: 496 LVEVAILDQLRTPLTHLIRNAFDHGLEFVPERQAQGKLPEGTITLSASTANNQVLITVSD 555

Query: 534 DGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDA 593
           DG+G+D E++  KA+E G +   +L  + + +++  +F+PGFST  +VS+LSGRG+G+D 
Sbjct: 556 DGRGIDPEKISRKAMELGWLTPEQLGTIGEAQMLDFLFQPGFSTAAEVSNLSGRGLGLDI 615

Query: 594 VRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKI 653
           V+  IE   GTLT+ ++ G+GS   + +PLS+ I  +++   +Q+  A P ESV++ L +
Sbjct: 616 VKQMIESLRGTLTVETKLGQGSRFLIRIPLSLNIVPLLLVRYQQRLLAFPSESVLRILPL 675

Query: 654 SRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSA--QIYPD-IQPI--------LVVR 702
                       D  I  G       +  A  ++    QIYP    P         L+V 
Sbjct: 676 D-----------DYPIKNGRVEWQSQIMEACPLDEVLPQIYPQGFSPSPGLPHKVGLMVN 724

Query: 703 VGDDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVL 751
           +GD    L V+++ + + +++K L+      S   G  ++G G V+ VL
Sbjct: 725 LGDRSALLTVEQIVDERTLVVKALDAITPIPSYVAGCTVLGTGEVVPVL 773



 Score = 35.0 bits (79), Expect = 2e-05
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 35 IINELFREIHTVKGASGILDNIAPFTQLAHRMEDLMQKVRDGHV 78
          +I ++ R  H++KG +G +  + P   L HR+EDL + +  G V
Sbjct: 53 LIQDMGRAAHSLKGGAG-MSALTPLQTLCHRLEDLFEALEQGRV 95