Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., chemotaxis protein (sensory transduction histidine kinase) from Sinorhizobium meliloti 1021

 Score =  287 bits (734), Expect = 2e-81
 Identities = 218/781 (27%), Positives = 366/781 (46%), Gaps = 59/781 (7%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGI--LDNIAP 58
           MN I + F  E  + +     GLL L     D   +N +FR +H++KG +G   LD++  
Sbjct: 3   MNEIKEIFFQECEEQLAELESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVS 62

Query: 59  FTQLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLW---------IEELEQHQ--- 106
           F   AH  E  +  VR   +  N  +L +ML   D              ++E    Q   
Sbjct: 63  F---AHVFETTLDCVRSNRLEPNQDVLKVMLRSADVLADLTNAARDGGGVDEARSRQLIK 119

Query: 107 ELSAEAVSISKQMIAQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVE 166
           EL A A     Q  A+ AP T  A    P   V  +E    ++ S          F+D E
Sbjct: 120 ELEALANGELPQAAAESAPKTTPAGV-APAAPVVNEEGFQPVAFS----------FDDFE 168

Query: 167 ALLE---HPDALLLIYTPDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDS-EPFDTYQAQ 222
              E    P    +++ P    +  G+D    +R + ++    +    D+  P D    +
Sbjct: 169 TGDEPTIEPSTYEIVFKPKSDLYSKGNDATLLLRDLSRLGEMSIHCNMDTLPPLDRMNPE 228

Query: 223 MQFLLLTQSAKKDLEQQLAPIEGQYRLYRIQSD-NLPTAPIDQRTQYVERIVKQQIALLR 281
             +     S K D  ++      ++  +  + D  L    +        + V   +++L 
Sbjct: 229 EAYFSWKISLKTDKGEEAIRSVFEFAEWDCELDVALAGGTVGMDEDLPMQPVPFDLSILE 288

Query: 282 EEQVSESVRAGTFLSIKNLYCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAI 341
           +E  + +              A + +   R A +  + +A  +        L  A  TA 
Sbjct: 289 DEAQAPAGEEDR---------AAASEGDSRNAAVAAAQTASNV--------LQMAQSTAR 331

Query: 342 IDKCENEPAQPSAITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAY 401
           +   EN     SA        +       T++VD ++VD L++LVGEL++ +  +     
Sbjct: 332 VSP-ENARNSQSASAAQAAAQQAASAATPTIRVDLDRVDRLINLVGELVINQAMLSQSVI 390

Query: 402 RAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLG 461
             +   G   +   ++  Q    +L  ++Q  VM +R  P+  VFQR  R++R+I+   G
Sbjct: 391 ENDTN-GTSSINMGLEELQ----QLTREIQDSVMAIRAQPVKPVFQRMSRIVREIADMTG 445

Query: 462 KQVDLIIEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAF 521
           K V LI EGE+TE DK++++ L+EPL H+IRNA+DHG+E+P+ R   GKNP G + L+A 
Sbjct: 446 KSVRLITEGENTEVDKTVIDKLAEPLTHMIRNAVDHGLETPEKRVAAGKNPEGTVRLTAK 505

Query: 522 TLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQV 581
                ++I+++DDG G++ E+V+ KA++  L+ A     +S +E+ +LIF  GFST +++
Sbjct: 506 HRSGRIVIELADDGAGINREKVRQKAIDNDLIAAD--ANLSDEEVDNLIFHAGFSTADKI 563

Query: 582 SDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFA 641
           SD+SGRGVGMD V+ +I+  GG + +SS+PG+GS  TM LPL++ +   M+  +  Q+  
Sbjct: 564 SDISGRGVGMDVVKRSIQALGGRINISSKPGQGSIFTMSLPLTLAVLDGMVVTVANQTLV 623

Query: 642 IPIESVIQTLKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYP-DIQPILV 700
           +P+ ++++TL+           +     +R    P++ + R      AQ  P +   +LV
Sbjct: 624 VPLTAIVETLQPEASAIHSFGSSQRLISIRDSFCPLVDVGRILNFRGAQANPVEGVALLV 683

Query: 701 VRVGDDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHA 760
              G     L VD +Q  + V+IK LE           A I+GDGRV L+LD + +V  +
Sbjct: 684 ESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPGIAAATILGDGRVALILDVDAIVAAS 743

Query: 761 R 761
           R
Sbjct: 744 R 744