Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

 Score =  284 bits (727), Expect = 1e-80
 Identities = 222/764 (29%), Positives = 379/764 (49%), Gaps = 102/764 (13%)

Query: 6   QNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGI--LDNIAPFTQLA 63
           + F  E+++L+E   + LL LE  PDD  +I+  FR +HT+KG+  +   D +A FT   
Sbjct: 8   ETFRQEAQELLEQLEQALLDLEHAPDDGDLIDSAFRALHTIKGSGSMFGFDAVAAFT--- 64

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123
           H +E     VR G V  +  ++ + L   D+  L IE+ E  +    +A+    + I   
Sbjct: 65  HHVETAFDLVRKGKVTPSRELIAVALAAKDRMRLLIEQPETPESAEGDAILRDLKAIVDA 124

Query: 124 APLTQAAPTHTPTPAVAAQEETATLS------ISELTELLGRDCFNDVEALLEHPDALLL 177
           + L  A         VAA+E+ A ++      ++     +G +    ++ L     A ++
Sbjct: 125 SDLPSAG--EGGDAPVAAREQPAEITWRIRFRLARDAMAMGTNPLLLLDELRTLGSATIV 182

Query: 178 IYT---PDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKK 234
             T   P  +     D  LAW            V++  S+P    +    F++       
Sbjct: 183 ALTGEVPSLEVLVPSDCHLAW-----------DVMLTTSQPRTAIEDVFMFVI------D 225

Query: 235 DLEQQLAPIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTF 294
           D+E  +  +E      RI    +    + Q  + V+  V +Q+ L      +  V +G  
Sbjct: 226 DMELSIDLLESGEEDRRIGEILVERGDVAQ--EAVDTAVSRQLPL-----GTLLVESGN- 277

Query: 295 LSIKNLYCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQPSA 354
           LS   L  AL++Q   R      +  AD +                        PA+   
Sbjct: 278 LSPDKLTSALAEQQHLRTETKVVAKGADSI----------------------RVPAE--- 312

Query: 355 ITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQ 414
             ++E +D+V +  I   ++ Q    +            N MQ           V+ +A+
Sbjct: 313 -RLDELMDRVGELVIAQSRLTQVAASI------------NDMQ-----------VKAIAE 348

Query: 415 DIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTE 474
           +I+       RLA +L+   M VRMVP++++F R+ RL+ D++  LGKQ++L   GE+TE
Sbjct: 349 EIE-------RLAHELRDTTMGVRMVPISSLFGRFRRLVHDLAHDLGKQIELTTFGEETE 401

Query: 475 ADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDD 534
            DK+++E L++PL+HLIRN++DHG+E+P+ R+E GK P G+ITLSA      V++ + DD
Sbjct: 402 LDKTVIERLNDPLIHLIRNSIDHGLETPEGRKEAGKPPAGRITLSARHSGAEVLVSIIDD 461

Query: 535 GKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAV 594
           G+G+D  R++ +A E+GL+      ++S  ++  +IF+ GFST + V+ LSGRGVGMD V
Sbjct: 462 GRGLDRARIQARAEEQGLLAPG--VKLSDNDLFQVIFQAGFSTAKVVTSLSGRGVGMDVV 519

Query: 595 RTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKIS 654
           +  IE   G + ++S PGKG+E+T+ LPL++ I   ++  + +  + +P+ +V + +++S
Sbjct: 520 KRTIEGLRGKIDIASTPGKGTELTLRLPLTLAIIDGLLVRVGKARYVLPLSAVEECVELS 579

Query: 655 RHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDR 714
             +D  R +      +RG+ VP L L+  F++ SA   P  Q +++V  G+  +GL VD+
Sbjct: 580 AEED-GRSRGRSFLNIRGDLVPFLRLRELFQV-SAPADP-YQKVVIVSSGEFRVGLVVDQ 636

Query: 715 LQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVK 758
           +      +IK L    A    + GA I+GDG V L+LD   +VK
Sbjct: 637 VIGNHQTVIKSLSKLHADVETFSGATILGDGAVALILDIGHLVK 680