Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 937 a.a., hybrid sensor histidine kinase/response regulator from Rhodopseudomonas palustris CGA009

 Score =  267 bits (682), Expect = 2e-75
 Identities = 139/394 (35%), Positives = 244/394 (61%), Gaps = 15/394 (3%)

Query: 370 KTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAE-NEFGVRKLAQDIKAEQSVISRLAE 428
           ++++V+ + ++ LM +V EL++ +N +  ++ R E NEF         K     +S +  
Sbjct: 255 QSIRVNVDTLEHLMTMVSELVLTRNQLLEISRRHEDNEF---------KVPLQRLSTVTA 305

Query: 429 DLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEPLV 488
           +LQ  VM+ RM P+   +Q+ PR++RD++ +LGKQ++L + G DTE D+ +++ + +PL 
Sbjct: 306 ELQDGVMKTRMQPIGNAWQKLPRIVRDLAAELGKQIELEMHGADTELDRQVLDLIKDPLT 365

Query: 489 HLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKAL 548
           H++RN+ DHG+E P+ R   GK   G I LSA+     ++I ++D+G+G+D ER+K KAL
Sbjct: 366 HMVRNSADHGLEKPEDRARAGKPEQGTIRLSAYHEGGHIVICIADNGRGLDTERIKAKAL 425

Query: 549 ERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLS 608
             GLV  ++LE+M++ +I   IF PGFST   V+ +SGRGVGMD VRT I++ GGT+ + 
Sbjct: 426 ANGLVTEAELEKMTEAQIHKFIFAPGFSTAAAVTSVSGRGVGMDVVRTNIDQIGGTIEVK 485

Query: 609 SEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKI---SRHKDIRRVKNL 665
           S  G+GS IT+ +PL++ I   ++ E     FAIP  +V++ ++    S H+ I R+K+ 
Sbjct: 486 SVAGEGSAITIKIPLTLAIVSALIVEAGGDRFAIPQLAVVELVRARANSEHR-IERIKDT 544

Query: 666 DTFILRGETVPILYLKRAFEMN-SAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVIIK 724
               LR + +P+++LK+   ++  A   P+   I+V +VG    G+ VD +   +++++K
Sbjct: 545 PVLRLRDKLLPLIHLKKLLGIDEGANSEPENGFIVVTQVGSQTFGIVVDGVFHTEEIVVK 604

Query: 725 PLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVK 758
           P+   L    ++ G  I+GDG V++++D   + +
Sbjct: 605 PMSTKLRHIGMFSGNTILGDGAVIMIVDPNGIAQ 638



 Score = 58.9 bits (141), Expect = 1e-12
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60
           M+ +++ F+ E+ + +++    L+  E  P++  I++ +FR +HT+KG  G L  +    
Sbjct: 1   MDDLLREFLTETFESLDTVDNQLVRFEQEPNNAKILDNIFRLVHTIKGTCGFL-GLPRLE 59

Query: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMI 120
            LAH  E LM K RDG + + G  + L+L   D+    + +LE  Q   AE       +I
Sbjct: 60  ALAHAAETLMGKFRDG-MPVTGEAVTLILTTIDRIKDILTQLEATQ---AEPEGEDGDLI 115

Query: 121 AQLAPLTQAAP 131
            +L  L+  +P
Sbjct: 116 GELERLSMRSP 126