Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  241 bits (615), Expect = 1e-67
 Identities = 149/416 (35%), Positives = 238/416 (57%), Gaps = 23/416 (5%)

Query: 351 QPSAITVNEQLDK---VKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEF 407
           Q +  T+ +  DK    +     +++V   K+D L+DLVGEL++ +  +   A+   ++ 
Sbjct: 307 QQAVRTIRQSRDKESTARDDSGASIRVAASKLDFLVDLVGELVIVQAQLSQAAH-LRSDP 365

Query: 408 GVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLI 467
           G+  L ++++       RL+++L+   + +RM+P+ T F ++ RL+RD+S +LGK V+L+
Sbjct: 366 GLLGLVEELE-------RLSDELRDTTLGIRMLPIGTTFSKFRRLVRDLSAELGKDVELV 418

Query: 468 IEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSV 527
             G +TE DK+++E L +PLVH +RN++DHG+ESPD+R   GK  TG +TLSA      V
Sbjct: 419 TLGGETELDKTVIERLGDPLVHCLRNSMDHGVESPDVRAAAGKPRTGTVTLSAAHAGGEV 478

Query: 528 IIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGR 587
           +I ++DDG G+D  RV   A  RG++ A  +E +  +E I LIF PGFST E+V+ +SGR
Sbjct: 479 LITIADDGAGIDPARVLEIARRRGVI-APDVE-LPAREAIELIFAPGFSTAEKVTSVSGR 536

Query: 588 GVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESV 647
           GVGMD V+ +IE   G + L S  G+G+ +T+ LPL++ I   +   +  +S+ IP+  V
Sbjct: 537 GVGMDVVKRSIEALRGRIELDSAVGRGTTLTIRLPLTLAIIDGLQVLVGGESYVIPLNHV 596

Query: 648 IQTLKISRHKDI---RRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVG 704
            +  + S        +R+ N     LRGE VP + L+  F   S+   P I+ ++VV   
Sbjct: 597 EECAEHSTPSSADGRQRIIN-----LRGEIVPYIRLRELFA--SSGPAPAIEQVVVVDAQ 649

Query: 705 DDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHA 760
               GL VD +      +IK L           GA I GDG + L+LD   +V+ A
Sbjct: 650 GSRFGLVVDCVVGEHQTVIKSLGRIYKDVPGISGATIKGDGSMALILDVPGLVQLA 705



 Score = 63.9 bits (154), Expect = 3e-14
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 8  FIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGI--LDNIAPFTQLAHR 65
          FI E++DL+      LL LEA PDD+ ++  +FR +HT+KG+  +   D+IA FT   H 
Sbjct: 12 FIEEAQDLLAELETALLELEAQPDDRDLVARVFRAMHTIKGSGAMFGFDDIAHFT---HD 68

Query: 66 MEDLMQKVRDGHVALNGTMLDLMLGCCD 93
          +E +  +VR+G V +   +LDL L   D
Sbjct: 69 VETVFDRVRNGEVPVTRQLLDLTLASRD 96