Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

 Score =  293 bits (751), Expect = 2e-83
 Identities = 155/404 (38%), Positives = 251/404 (62%), Gaps = 16/404 (3%)

Query: 356 TVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQD 415
           T  +Q +    K+ +T++V+ EK+D LM+LVGE+++ + +   +A +            D
Sbjct: 530 TSKKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATK-----------YD 578

Query: 416 IKAEQSVISRL---AEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGED 472
           +K   + + RL   A +LQ  VM +RM+P+A VF R+PR +RD ++ L K++D  IEG D
Sbjct: 579 LKELHNAVGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSD 638

Query: 473 TEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMS 532
            E D++++++L+EPL HLIRN+LDHGIE  D R + GK   G + L A    D V I + 
Sbjct: 639 IELDRTVLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIR 698

Query: 533 DDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMD 592
           DDGKG+D E ++ KA E+GL    + E+++  E +++IF PGFST E VSD+SGRGVGMD
Sbjct: 699 DDGKGIDPEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMD 758

Query: 593 AVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLK 652
            VR+ IE  GG++T++SE GKG+EIT+ LPL+M I + ++  L +  +A+P+ SV+  + 
Sbjct: 759 VVRSKIESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVIS 818

Query: 653 ISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAV 712
           + + + I+ ++  +  I R   +P+++LK A   +      D+  ++VV      +G+ +
Sbjct: 819 VEK-EQIKNLEGQEAIIYRNHILPVIWLKDALNTSGFSDSDDLY-VVVVEKNKGKVGMIL 876

Query: 713 DRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEV 756
           D +    ++++KPL G L   +   GA I+GDGRV L+LD   +
Sbjct: 877 DEVIGRDEIVVKPLTGILKNINGLAGATILGDGRVALILDLNNI 920



 Score = 63.5 bits (153), Expect = 5e-14
 Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDD-KAIINELFREIHTVKGASGILDNIAPF 59
           M    + F+ E+ + ++S  + ++ LE  P+D + IIN +FR  HT+KG++  L      
Sbjct: 4   MEQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTL-GFEHI 62

Query: 60  TQLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQM 119
           + L H MED++  +RDG + +N  ++DL+  C D     + E+   ++ ++  V    ++
Sbjct: 63  SSLTHHMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEV 122

Query: 120 I 120
           I
Sbjct: 123 I 123