Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 1089 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  331 bits (848), Expect = 1e-94
 Identities = 174/395 (44%), Positives = 261/395 (66%), Gaps = 9/395 (2%)

Query: 367  KQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAEN---EFGVRKLAQDIKAEQSVI 423
            K   T++VD EK+D LM+L+GELI+ +N    LA   E       V ++AQ++      +
Sbjct: 690  KASSTIRVDHEKLDHLMNLIGELIINRNRYSMLARHLEEGGASVNVAEVAQNLSETTYAM 749

Query: 424  SRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDL 483
            +R+++DLQ  +M+VRMVP+++VF R+PRL+RD+SRK GK+VDL++EGE+TE DKS+VE +
Sbjct: 750  ARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLVLEGEETELDKSVVEVI 809

Query: 484  SEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERV 543
             +PLVHLIRN++DHG+E  + R  +GK P G +TL AF   +SV I++ DDGKG+D E++
Sbjct: 810  GDPLVHLIRNSVDHGVEPEEERIAKGKKPKGVVTLRAFHKGNSVAIEIEDDGKGIDPEKM 869

Query: 544  KTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGG 603
            +  A+ +G+V   + + M  +E + LIF PGFS+ E+++D+SGRGVGMD VRT I+   G
Sbjct: 870  REVAVRKGIVTPEEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKG 929

Query: 604  TLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVK 663
            ++++ SE GKG+  T+ LPL++ I   +M  +  Q +AIP+++V +T KI   + +  VK
Sbjct: 930  SVSIHSEVGKGTRFTLSLPLTLAIIDALMVNVAGQMYAIPLDAVSETTKIEARR-LTDVK 988

Query: 664  NLDTFILRGETVPILYLKR--AFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDV 721
                  LRGE + I+ L    A   + AQ   D+  ++V+   D  LGL VDRL E Q++
Sbjct: 989  GRKAVTLRGEVLGIVDLSELLALPRSDAQ---DVLSVVVIHDNDRRLGLVVDRLLERQEI 1045

Query: 722  IIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEV 756
            +IKPL   L       GA IMGDG V+L+LD  E+
Sbjct: 1046 VIKPLGAYLGDLKGISGATIMGDGSVILILDPHEI 1080



 Score = 79.7 bits (195), Expect = 8e-19
 Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 6/153 (3%)

Query: 1   MNP-IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPF 59
           M+P I  +FI+E+++ +E+    LL LE  PD+ A++NE+FR +H++KGASG L  +   
Sbjct: 6   MDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFL-GLNRM 64

Query: 60  TQLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELE---QHQELSAEAVSIS 116
            QLAHR E+++ ++R G + +   ++D++L   D     I+ LE   Q  +++ E++  +
Sbjct: 65  NQLAHRAENILDELRKGAMVVTSEIMDVILAVTDALRQMIDNLESSGQEGDVAIESLITT 124

Query: 117 KQMIAQLAPLTQAAPTHTPTPAVAAQEETATLS 149
              I        AAP   P   VA  E  A ++
Sbjct: 125 IDAIMAGGGAVPAAPA-APASPVAPVEPVAAVT 156



 Score = 62.0 bits (149), Expect = 2e-13
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 5   MQNFIIESRDLIESAARGLLALEANPDDK-AIINELFREIHTVKGASGILDNIAPFTQLA 63
           +++FI E+R++ E    GLL LE +PD+K   +N+LFR  H +KG SGI+        L 
Sbjct: 246 LKDFIDEAREMTEQLGTGLLELERHPDEKDDRVNDLFRFFHNLKGNSGII-GFRELNGLT 304

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123
           H  E L+  +R G +  +  ++DL+L   D     +  +E     +A  +     +   L
Sbjct: 305 HEAETLLNNIRRGEMQSSAELVDLLLFVVDVIDALVNRIE-----TASGMVHGFDISEVL 359

Query: 124 APLTQA---APTHTPTPAVAAQEETATLSISELT 154
            PL QA        P   V   ++ A+   +E T
Sbjct: 360 EPLQQAVAGGEARLPVGIVGMAKQAASQPAAEST 393