Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  211 bits (537), Expect = 1e-58
 Identities = 127/405 (31%), Positives = 222/405 (54%), Gaps = 15/405 (3%)

Query: 356 TVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQD 415
           +V  ++ +  +    +++V+  K+D L+  VGEL++ ++ +  L  R   +  +R++A+ 
Sbjct: 298 SVASEVAQAAEASSSSIRVESAKLDRLVGFVGELVILQSRLSQLV-RGVPDDAMREVAEG 356

Query: 416 IKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEA 475
           ++       RLA  L+   M +RMVP+ + F  + RL+RD++ +LGK+V    EG DTE 
Sbjct: 357 LE-------RLAGSLRDSAMSMRMVPMGSTFHSFRRLVRDLAAQLGKKVLFEAEGGDTEL 409

Query: 476 DKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDG 535
           DK++++ L +PL+HL+RNA+DHGIE P++R   GK   G + L A      V I +SDDG
Sbjct: 410 DKTLIDQLRDPLLHLLRNAMDHGIEPPEVRLATGKPEEGVVRLGASHSGGEVHIYVSDDG 469

Query: 536 KGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVR 595
            GVD+E+V+ +A+  GL+            ++ L++ PGF+T   VS++SGRGVGMD V 
Sbjct: 470 AGVDLEKVRLRAVAMGLIPPE--TEPDTATLLALLYVPGFTTAPGVSEISGRGVGMDVVH 527

Query: 596 TAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISR 655
           +AI    G+L + + PG+G+   + LPL++ I   M   +   S+ +P+  V   L+   
Sbjct: 528 SAIAALRGSLDMETTPGRGTTCHIRLPLTLAIIDGMRVLVGGDSYIVPLTMVEACLERFV 587

Query: 656 HKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRL 715
              +R V+ ++    RG  +P + L+    +   Q  P  + ++V       +G AVD +
Sbjct: 588 DGAVRTVECIE---YRGRLIPCVSLRLLLGVPGEQ--PGYERVIVAGKEGHEVGFAVDAV 642

Query: 716 QEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHA 760
              Q  +IK +       +   G  +  DG + L+LD  ++++ A
Sbjct: 643 VGLQQAVIKGVGNLCRNVAWISGTTVDADGGISLILDVVQLIRFA 687



 Score = 59.7 bits (143), Expect = 5e-13
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
           +M+ F  E+R+L+       L LE  PDD+A++  +FR +HT+KG SG +       ++A
Sbjct: 7   VMRLFGDEARELLIDMESLFLELEQTPDDRALVARVFRTMHTLKG-SGAMFGYTEAARVA 65

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIE 100
           H +ED+  +VR G + L   +L L L   D     +E
Sbjct: 66  HALEDVFDRVRHGRLPLTSELLGLCLEAKDHLQTLLE 102