Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., chemotaxis histidine kinase protein cheAII from Caulobacter crescentus NA1000

 Score =  263 bits (671), Expect = 3e-74
 Identities = 138/411 (33%), Positives = 248/411 (60%), Gaps = 19/411 (4%)

Query: 350 AQPSAITVNEQLDKVKKKQI------KTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRA 403
           A P+A    +Q D   +  +      +T++V  + ++ +M LV EL++ +N +  L    
Sbjct: 187 ASPAATFEPDQTDSAPEALVSESLGPQTIRVGVDVLEDMMTLVSELVLTRNQLLQLNRGR 246

Query: 404 ENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQ 463
            +E     L +        +S +  +LQ  VM+ RM P+   +++ PRL+RD+S +LGK 
Sbjct: 247 GDETFTPPLQR--------LSSITGELQDSVMKTRMQPIGQAWKKLPRLVRDLSGELGKP 298

Query: 464 VDLIIEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTL 523
           ++L++EGE TE D+ ++E + +PL H++RN+ DHG+E P+ RR  GK   G I LSA+  
Sbjct: 299 IELVMEGEATELDRQVLEQIRDPLTHMVRNSADHGLEGPEARRAAGKPEAGLIHLSAYHE 358

Query: 524 DDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSD 583
             +++I++ DDG+G+D  R++ KA+E+G+V  ++ E M++ ++  LIF PGFST   V++
Sbjct: 359 GGAIVIRLRDDGRGLDTARIREKAIEKGIVGRAEAETMTEAQVHRLIFAPGFSTAAVVTN 418

Query: 584 LSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIP 643
           +SGRGVGMD VR+ IE+ GG + L S  G+G  +T+ +PL++ I   ++     + FA+P
Sbjct: 419 VSGRGVGMDVVRSNIEQIGGQIELQSTLGQGCVVTVKIPLTLAIVSALIIRAAGERFAVP 478

Query: 644 IESVIQTLKISRHKDIR--RVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVV 701
             SV + +K+S   D R   ++++    LR + +P++ L    E    +   + + +L++
Sbjct: 479 QASVQELVKVSADSDHRFEEIEHVRMLRLREQLIPLIDLS---EELGRERRHEAKFVLIM 535

Query: 702 RVGDDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLD 752
           RVG    G+ V+ + + +++++KPL   L T  ++ GA ++GDG V+L++D
Sbjct: 536 RVGAHRFGVLVEEVIDTEEIVVKPLASVLRTIPVFSGATLLGDGSVVLIID 586



 Score = 63.9 bits (154), Expect = 3e-14
 Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 5/168 (2%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60
           M+ ++ +F++E+ + +E     L+  EA P+D+A ++++FR +HT+KGA G L  +    
Sbjct: 1   MDDLIADFLVEAHEGLEVIDVELVRFEARPEDRAALDKIFRLVHTLKGACGFL-GLGRLE 59

Query: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMI 120
            +AH  E L+ + RDG + ++   +  +L   D+  + ++ L    +L  E       +I
Sbjct: 60  AIAHAGETLLGRFRDGRLEVSSQAVTAVLSAIDRIKMILDGL---GDLGREPEGDDTALI 116

Query: 121 AQLAPLTQAAPTHTPTPAVAAQEE-TATLSISELTELLGRDCFNDVEA 167
             L   +  A     +P  A  E   A ++  E T   G     ++EA
Sbjct: 117 QALEAFSDGAAPSEQSPVAAEPEPLAADVAAPERTLRPGEVSLEELEA 164