Pairwise Alignments

Query, 126 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 121 a.a., chemotaxis protein CheY (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.7 bits (234), Expect = 4e-25
 Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 2/121 (1%)

Query: 3   KSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDG 62
           K IL+VDDS+++   V   L   G++V  A DG +A ++L G  K+NLII+D+NMP MDG
Sbjct: 2   KKILVVDDSASIRHVVSIALRGAGYEVIDACDGKDALSKLNGD-KINLIISDVNMPNMDG 60

Query: 63  IELISKIRAIASYRFTPILVLTTEQEQAKRNEARAKGATGYLVKPVTGDQ-LKAVIQQVL 121
           I  + +++    Y+FTP+++LTTE  + K  E R  GA  ++VKP    Q L AV +  L
Sbjct: 61  ISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVVKPFQPPQMLDAVAKLCL 120

Query: 122 P 122
           P
Sbjct: 121 P 121