Pairwise Alignments

Query, 126 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 121 a.a., chemotaxis protein CheY (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.0 bits (245), Expect = 2e-26
 Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 1/121 (0%)

Query: 1   MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRM 60
           MSK ILIVDDS+ +   V+A L    +QV  AKDG EA   L    + + I+TD NMPRM
Sbjct: 1   MSKKILIVDDSAAIRQMVEATLKSANYQVTLAKDGREA-LDLCSSQRFDFILTDQNMPRM 59

Query: 61  DGIELISKIRAIASYRFTPILVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQV 120
           DG+ LI  +R ++++  TPI++LTTE     + + +A GATG++VKP    +L A+  +V
Sbjct: 60  DGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAVGATGWMVKPFDPQKLLAITAKV 119

Query: 121 L 121
           L
Sbjct: 120 L 120