Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 92.0 bits (227), Expect = 4e-23
 Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 4/137 (2%)

Query: 159 VISNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAAR 218
           V +    + + L  ++ +  + VN + N    +  + +VI  IA++TNLLALNAAIEAAR
Sbjct: 320 VTAETRKAIQQLADSVASTGEAVNQLANDSDAIGGVVDVIKSIADQTNLLALNAAIEAAR 379

Query: 219 SGEMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADM 278
           +G+ GRGFAVVADEVR LAQR  EA  +I + IE L+ +       A + + E  ++A  
Sbjct: 380 AGDSGRGFAVVADEVRQLAQRTAEATGEIHQLIEKLQLQARH----AVQTTEEGRVQATR 435

Query: 279 MIESVQSLRQSFSSVRE 295
            ++ V    Q+ + + E
Sbjct: 436 GVDQVAQADQALTGINE 452