Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  102 bits (254), Expect = 3e-26
 Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 28/284 (9%)

Query: 64  GNLFVRFLQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQK-ATEDIL 122
           GN F  F+++IH+        TV      ++E   L  L A +   +NSD Q   T  + 
Sbjct: 337 GNGFNLFVERIHDSMREVASSTVQ-----LNEVA-LRVLNASNSSMLNSDQQSHRTNSVA 390

Query: 123 NHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQVN 182
             I  L  A              S +  +   +   V+    ++   L   I +   Q+ 
Sbjct: 391 AAINELGAATQEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIE 450

Query: 183 DVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRAGE 242
            +  +   + +I +VI+ I+ +TNLLALNAAIEAAR+GE GRGFAVVADEVR LA R  E
Sbjct: 451 TLNTKTANIGQILDVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQE 510

Query: 243 AASQISEEIESLRA--------------EVTQRFEVANK------ESSEQNIKADMMIES 282
           +ASQ+ E IE L++              E  +   +ANK        +E+  + D M +S
Sbjct: 511 SASQVQEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMNQS 570

Query: 283 VQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSM-ACTQFQ 325
           V +  +  ++V E     IT+I   N    +N++ ++ ACT  +
Sbjct: 571 VAAATEEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLE 614