Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score = 98.2 bits (243), Expect = 5e-25
 Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 39/268 (14%)

Query: 71  LQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATEDILNHICSLDH 130
           L+QI E+  M    TV    +     +DLNG+V +H++ +  +  +A   + +    L+ 
Sbjct: 224 LRQIREKSDMTVSFTVFRDDELGHIAKDLNGVV-NHLKGILKNIAEAASTLGDSADELNE 282

Query: 131 AAANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRS--------------------- 169
                   +   + +++   ++++E T  ++ +A S+ S                     
Sbjct: 283 FTRQANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQ 342

Query: 170 -------LMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEM 222
                  L S IQ     + ++      +  + +VI  IA +TNLLALNAAIEAAR+GE 
Sbjct: 343 SISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQ 402

Query: 223 GRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQ----------RFEVANKESSEQ 272
           GRGFAVVADEVR LAQR  E+  +I   IESL+  V            + + AN+ ++  
Sbjct: 403 GRGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAA 462

Query: 273 NIKADMMIESVQSLRQSFSSVRELSERQ 300
                 ++ SV S+ Q  + +   ++ Q
Sbjct: 463 GSALQDIVASVDSITQLNTHIATAADEQ 490